SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_005247
Gene Symbol: FGF3
Description: Homo sapiens fibroblast growth factor 3 (FGF3), mRNA.
Gene Location: chr11(-):69624735-69634192
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.69810161C>T COSN9031607 8051720 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3654 atcaggGTCCAGTgggaac
 1
 GACUGGAC m7b Disrupted -0.157000 no TS 1.310000
hsa-miR-4301 atcagggtcTAGTGGGAac
 1
 UCCCACUA m8a (m7a->m8a) -0.144000 -0.329000 -2.640000
hsa-miR-4725-5p atCAGGGTCTagtgggaac
 0 AGACCCUG m8a (m7b->m8a) -0.236000 -0.264000 -1.000000
hsa-miR-504 atCAGGGTCTagtgggaac
 0 AGACCCUG m8a (m7b->m8a) -0.245000 -0.273000 -1.000000
hsa-miR-711 atcaGGGTCCagtgggaac
 0 GGGACCCA m6b Disrupted -0.200000 no TS 1.030000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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