| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_000639 |
|---|---|
| Gene Symbol: | FASLG |
| Description: | Homo sapiens Fas ligand (TNF superfamily, member 6) (FASLG), mRNA. |
| Gene Location: | chr1(+):172628184-172636012 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.172666368C>T | COSN5733730 | HX20T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-let-7a-5p |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.249000 | -0.079000 |
3.820000 |
| hsa-let-7b-5p |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.249000 | -0.079000 |
3.820000 |
| hsa-let-7c |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.249000 | -0.079000 |
3.820000 |
| hsa-let-7d-5p |
tgggccttgCTACCTCaag |
16 |
AGAGGUAG | m7b | (m7b->m6c) | -0.259000 | -0.082000 |
4.120000 |
| hsa-let-7e-5p |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.249000 | -0.079000 |
1.510000 |
| hsa-let-7f-5p |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.238000 | -0.075000 |
4.310000 |
| hsa-let-7g-5p |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.238000 | -0.075000 |
4.320000 |
| hsa-let-7i-5p |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.238000 | -0.075000 |
4.320000 |
| hsa-miR-4458 |
tgggccttgCTACCTCaag |
16 |
AGAGGUAG | m7b | (m7b->m6c) | -0.259000 | -0.082000 |
-0.280000 |
| hsa-miR-4500 |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.249000 | -0.079000 |
4.310000 |
| hsa-miR-4708-3p |
tggGCCTTGCTacctcaag |
2 |
AGCAAGGC | m8a | Disrupted | -0.160000 | no TS |
2.820000 |
| hsa-miR-98 |
tgggccttgCTACCTCAag |
16 |
UGAGGUAG | m8a | (m8a->m7b) | -0.249000 | -0.079000 |
4.320000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.172666528C>T | COSN7184600 | 8058184 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-197-3p |
ctgagccatTGGTGAAact |
0 | UUCACCAC | m7a | (m6b->m7a) | no TS | -0.112000 |
-0.230000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.172666602A>G | COSN8636821 | 1428_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-500a-3p |
tgtatttccGGTGCAattg |
0 | AUGCACCU | m6b | Created | no TS | -0.179000 |
-0.140000 |
| hsa-miR-875-3p |
tgtaTTTCCAGtgcaattg |
8 |
CCUGGAAA | m7b | Disrupted | -0.124000 | no TS |
-0.070000 |