SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001017961
Gene Symbol: FAM78B
Description: Homo sapiens family with sequence similarity 78, member B (FAM78B), mRNA.
Gene Location: chr1(-):166039255-166135958
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.166070148C>T COSN8636682 3765_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-24-3p gtttCTGAGCCAaagcaga
 17
 UGGCUCAG m8a Disrupted -0.385000 no TS 2.360000
hsa-miR-4284 gtttcTGAGCCaaagcaga
 17
 GGGCUCAC m6b Disrupted -0.150000 no TS 2.360000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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