| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_015398 |
|---|---|
| Gene Symbol: | FAM149A |
| Description: | Homo sapiens family with sequence similarity 149, member A (FAM149A), transcript variant 2, mRNA. |
| Gene Location: | chr4(+):187065994-187093817 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr4:g.186172553C>G | COSN7634087 | PCSI_0218_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1302 |
tggcaaaaTGTCCCAAgct |
0 | UUGGGACA | m8a | Created | no TS | -0.465000 |
-1.120000 |
| hsa-miR-30b-3p |
tggcaaaatCTCCCAagct |
5 |
CUGGGAGG | m6b | Disrupted | -0.149000 | no TS |
3.700000 |
| hsa-miR-30c-1-3p |
tggcaaaaTCTCCCAagct |
5 |
CUGGGAGA | m7b | Disrupted | -0.420000 | no TS |
10.760000 |
| hsa-miR-30c-2-3p |
tggcaaaaTCTCCCAagct |
5 |
CUGGGAGA | m7b | Disrupted | -0.409000 | no TS |
7.860000 |
| hsa-miR-3122 |
tggcaaaatGTCCCAAgct |
0 | GUUGGGAC | m7b | (m6c->m7b) | no TS | -0.243000 |
-1.830000 |
| hsa-miR-3689a-3p |
tggcaaaatCTCCCAagct |
5 |
CUGGGAGG | m6b | Disrupted | -0.142000 | no TS |
4.250000 |
| hsa-miR-3689b-3p |
tggcaaaatCTCCCAagct |
5 |
CUGGGAGG | m6b | Disrupted | -0.142000 | no TS |
3.990000 |
| hsa-miR-3689c |
tggcaaaatCTCCCAagct |
5 |
CUGGGAGG | m6b | Disrupted | -0.142000 | no TS |
3.990000 |
| hsa-miR-3913-5p |
tggcaaaatGTCCCAAgct |
0 | UUUGGGAC | m7b | (m6c->m7b) | no TS | -0.262000 |
-1.000000 |
| hsa-miR-4298 |
tggcaaaaTGTCCCAagct |
0 | CUGGGACA | m7b | Created | no TS | -0.444000 |
-0.740000 |