SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_005239 |
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Gene Symbol: | ETS2 |
Description: | Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) (ETS2), transcript variant 1, mRNA. |
Gene Location: | chr21(+):40177848-40196878 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr21:g.38823346A>G | COSN9158611 | AOCS-130-1-0 | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-let-7a-3p |
agtTTGTATAtattattat |
0 | CUAUACAA | m7b | (m7b->m6b) | -0.272000 | -0.153000 |
0.500000 |
|
hsa-let-7b-3p |
agtTTGTATAtattattat |
0 | CUAUACAA | m7b | (m7b->m6b) | -0.253000 | -0.134000 |
0.540000 |
|
hsa-let-7f-1-3p |
agtTTGTATAtattattat |
0 | CUAUACAA | m7b | (m7b->m6b) | -0.224000 | -0.115000 |
0.540000 |
|
hsa-miR-1185-1-3p |
agttTGTATATattattat |
0 | AUAUACAG | m7a | Disrupted | NA | NA |
0.050000 |
|
hsa-miR-1185-2-3p |
agttTGTATATattattat |
0 | AUAUACAG | m7a | Disrupted | NA | NA |
0.410000 |
|
hsa-miR-1277-5p |
agtttgtATATATTattat |
7 |
AAAUAUAU | m7b | Disrupted | -0.039000 | no TS |
0.200000 |
|
hsa-miR-369-3p |
agtttgtatGTATTATTat |
3 |
AAUAAUAC | m8a | (m7b->m8a) | -0.051000 | -0.149000 |
-0.600000 |
|
hsa-miR-374c-5p |
agtttgtaTGTATTATtat |
6 |
AUAAUACA | m8a | Created | -0.081000 | -0.234000 |
-1.510000 |
|
hsa-miR-5011-5p |
agtttgTATATATtattat |
11 |
UAUAUAUA | m7b | Disrupted | -0.014000 | no TS |
0.260000 |
|
hsa-miR-5692b |
agtttgtatATATTATTat |
3 |
AAUAAUAU | m8a | (m8a->m7b) | -0.015000 | 0.058000 |
-0.080000 |
|
hsa-miR-5692c |
agtttgtatATATTATTat |
3 |
AAUAAUAU | m8a | (m8a->m7b) | -0.015000 | 0.058000 |
-0.020000 |
|
hsa-miR-655 |
agtttgtaTGTATTATtat |
6 |
AUAAUACA | m8a | Created | -0.091000 | -0.244000 |
-2.510000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr21:g.38823684T>C | COSN5136317 | PD3904a | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3973 |
caaggACTTTGTacatttg |
0 | ACAAAGUA | m7a | Disrupted | NA | NA |
0.010000 |
|
hsa-miR-520d-5p |
caaggaCTTTGTAcatttg |
10 |
CUACAAAG | m7b | Disrupted | 0.031000 | 0.027000 |
0.140000 |
|
hsa-miR-520g |
caaggACTTTGTacatttg |
0 | ACAAAGUG | m7a | Disrupted | NA | NA |
2.840000 |
|
hsa-miR-520h |
caaggACTTTGTacatttg |
0 | ACAAAGUG | m7a | Disrupted | NA | NA |
3.890000 |
|
hsa-miR-524-5p |
caaggaCTTTGTAcatttg |
10 |
CUACAAAG | m7b | Disrupted | 0.043000 | 0.020000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr21:g.38823695G>A | COSN4783778 | tumor_4170686 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-150-5p |
tacatTTGGGAGtttttat |
2 |
UCUCCCAA | m7b | Disrupted | -0.200000 | no TS |
0.220000 |
hsa-miR-186-3p |
tacaTTTGGGagtttttat |
8 |
GCCCAAAG | m6b | Disrupted | -0.010000 | no TS |
-0.200000 |
hsa-miR-5582-3p |
tacatttggAAGTTTTtat |
0 | UAAAACUU | m7b | (m6c->m7b) | no TS | 0.043000 |
-0.190000 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
38823353 | rs530 | T | T |
hsa-miR-369-3p hsa-miR-374a-5p hsa-miR-374b-5p hsa-miR-5692b hsa-miR-5692c |
3 3 3 3 3 |
tatTATTATAatc tatTATTATAAtc tatTATTATAAtc tatTATTATAatc tatTATTATAatc |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
0.005 0.003 0.024 0.027 0.027 |
A |
hsa-miR-126-5p hsa-miR-4795-3p |
4 4 |
tattaTAATAATc tattATAATAAtc |
Created Created |
N N |
-0.054 0.024 |
|||
38823695 | rs184055024 | G | G |
hsa-miR-150-5p hsa-miR-186-3p |
2 8 |
atTTGGGAGtttt aTTTGGGAgtttt |
Disrupted Disrupted |
N N |
-0.2 -0.01 |