SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_207332
Gene Symbol:	ERICH1
Description:	Homo sapiens glutamate-rich 1 (ERICH1), mRNA.
Gene Location:	chr8(-):614199-681226
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr8:g.664389A>G			COSN14650216		ASHPC_0002_Pa_P_4		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-5011-5p	caatTATATATAtcttgaa	1	UAUAUAUA	m8a	Disrupted	-0.222000	no TS	2.630000
hsa-miR-5580-3p	caattATATGTatcttgaa	0	CACAUAUG	m6b	Created	no TS	-0.054000	-0.580000
hsa-miR-5011-5p	caatTATATATAtcttgaa	1	UAUAUAUA	m8a	Disrupted	-0.222000	no TS	2.630000
hsa-miR-5580-3p	caattATATGTatcttgaa	0	CACAUAUG	m6b	Created	no TS	-0.054000	-0.580000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Germline mutations in target sites of miRNAs in somatic mutation table

Location	SNP ID	Ancestral Allele	Allele	miR ID	Conservation	miRSite	FuncClass	Validation	context+ score change
664389	rs7001007	A	A	hsa-miR-190a-3p hsa-miR-410-3p hsa-miR-5011-5p	1 2 1	ttATATATAtctt TTATATAtatctt tTATATATAtctt	Disrupted Disrupted Disrupted	N N N	-0.089 -0.001 -0.222
			G	hsa-miR-5580-3p	1	ttATATGTAtctt	Created	N	-0.054

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