SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_173641
Gene Symbol: EPHA10
Description: Homo sapiens EPH receptor A10 (EPHA10), transcript variant 3, mRNA.
Gene Location: chr1(-):38225944-38230824
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.37760624C>G COSN1444780 RK006_C02 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1587 ctacagCAGCCCAAtcttc
2
UUGGGCUG m8a Disrupted -0.490000 -0.127000 0.110000
hsa-miR-370 ctaCAGCAGGCcaatcttc
0 GCCUGCUG m8a Created no TS -0.177000 -9.550000
hsa-miR-4492 ctacagCAGCCCaatcttc
2
GGGGCUGG m6b Disrupted -0.143000 no TS No effect
hsa-miR-4498 ctacagCAGCCCAatcttc
2
UGGGCUGG m7a Disrupted -0.157000 no TS 0.140000
hsa-miR-4656 ctacagCAGCCCAatcttc
2
UGGGCUGA m7a Disrupted -0.174000 no TS No effect
hsa-miR-4674 ctacagcAGCCCAatcttc
4
CUGGGCUC m6b Disrupted -0.507000 -0.370000 0.040000
hsa-miR-4675 ctacagCAGCCCaatcttc
2
GGGGCUGU m6b Disrupted -0.173000 no TS 0.020000
hsa-miR-4741 ctacagCAGCCCaatcttc
2
CGGGCUGU m6b Disrupted -0.176000 no TS 0.350000
hsa-miR-5001-5p ctacagCAGCCCaatcttc
2
AGGGCUGG m6b Disrupted -0.157000 no TS No effect
hsa-miR-762 ctacagCAGCCCaatcttc
2
GGGGCUGG m6b Disrupted -0.143000 no TS -0.110000
hsa-miR-1587 ctacagCAGCCCAAtcttc
0 UUGGGCUG m8a Disrupted -0.49 -0.127 0.11
hsa-miR-370 ctaCAGCAGGCcaatcttc
0 GCCUGCUG m8a Created no TS -0.177 -9.55
hsa-miR-4492 ctacagCAGCCCaatcttc
0 GGGGCUGG m6b Disrupted -0.143 no TS No effect
hsa-miR-4498 ctacagCAGCCCAatcttc
0 UGGGCUGG m7a Disrupted -0.157 no TS 0.14
hsa-miR-4656 ctacagCAGCCCAatcttc
0 UGGGCUGA m7a Disrupted -0.174 no TS No effect
hsa-miR-4674 ctacagcAGCCCAatcttc
0 CUGGGCUC m6b Disrupted -0.507 -0.37 0.04
hsa-miR-4675 ctacagCAGCCCaatcttc
0 GGGGCUGU m6b Disrupted -0.173 no TS 0.02
hsa-miR-4741 ctacagCAGCCCaatcttc
0 CGGGCUGU m6b Disrupted -0.176 no TS 0.35
hsa-miR-5001-5p ctacagCAGCCCaatcttc
0 AGGGCUGG m6b Disrupted -0.157 no TS No effect
hsa-miR-762 ctacagCAGCCCaatcttc
0 GGGGCUGG m6b Disrupted -0.143 no TS -0.11


Mutation Mutation ID Sample Name Cancer Type
chr1:g.37760826T>C ICGC_BD90E4D2-2A78-11E2-BDED-1EFD496BB9B8 CPCG_0103_Pr_P_P4 ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Mutation Mutation ID Sample Name Cancer Type
chr1:g.37761131T>G COSN1103892 HCC24T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.37761238A>T COSN1444781 RK092_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1304-3p tttcCAGTGAGtccagtca
1
UCUCACUG m7b Disrupted -0.141000 no TS 0.010000
hsa-miR-3680-5p tttccAGTGAGTCcagtca
1
GACUCACU m8a Disrupted -0.109000 no TS 0.230000
hsa-miR-378a-3p tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS -0.040000
hsa-miR-378b tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.159000 no TS -0.060000
hsa-miR-378c tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS -0.070000
hsa-miR-378d tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS -0.050000
hsa-miR-378e tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS -0.070000
hsa-miR-378f tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS -0.060000
hsa-miR-378h tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS 0.816000
hsa-miR-378i tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.141000 no TS 1.130000
hsa-miR-422a tttccagtgAGTCCAGTca
2
ACUGGACU m8a (m8a->m7a) -0.150000 no TS 0.450000
hsa-miR-4638-3p tttccagtgTGTCCAGtca
0 CCUGGACA m7b (m6b->m7b) no TS -0.148000 -5.330000
hsa-miR-603 tttccAGTGTGTccagtca
1
CACACACU m7b Created -0.150000 -0.233000 -1.570000
hsa-miR-1304-3p tttcCAGTGAGtccagtca
0 UCUCACUG m7b Disrupted -0.141 no TS 0.01
hsa-miR-3680-5p tttccAGTGAGTCcagtca
0 GACUCACU m8a Disrupted -0.109 no TS 0.23
hsa-miR-378a-3p tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS -0.04
hsa-miR-378b tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.159 no TS -0.06
hsa-miR-378c tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS -0.07
hsa-miR-378d tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS -0.05
hsa-miR-378e tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS -0.07
hsa-miR-378f tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS -0.06
hsa-miR-378h tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS 0.816
hsa-miR-378i tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.141 no TS 1.13
hsa-miR-422a tttccagtgAGTCCAGTca
0 ACUGGACU m8a (m8a->m7a) -0.15 no TS 0.45
hsa-miR-4638-3p tttccagtgTGTCCAGtca
0 CCUGGACA m7b (m6b->m7b) no TS -0.148 -5.33
hsa-miR-603 tttccAGTGTGTccagtca
0 CACACACU m7b Created -0.15 -0.233 -1.57

Mutation Mutation ID Sample Name Cancer Type
chr1:g.37761304G>A COSN8862242 SNUH_G10_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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