SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_173641 |
---|---|
Gene Symbol: | EPHA10 |
Description: | Homo sapiens EPH receptor A10 (EPHA10), transcript variant 3, mRNA. |
Gene Location: | chr1(-):38225944-38230824 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.37760624C>G | COSN1444780 | RK006_C02 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1587 |
ctacagCAGCCCAAtcttc |
2 |
UUGGGCUG | m8a | Disrupted | -0.490000 | -0.127000 |
0.110000 |
hsa-miR-370 |
ctaCAGCAGGCcaatcttc |
0 | GCCUGCUG | m8a | Created | no TS | -0.177000 |
-9.550000 |
hsa-miR-4492 |
ctacagCAGCCCaatcttc |
2 |
GGGGCUGG | m6b | Disrupted | -0.143000 | no TS | No effect |
hsa-miR-4498 |
ctacagCAGCCCAatcttc |
2 |
UGGGCUGG | m7a | Disrupted | -0.157000 | no TS |
0.140000 |
hsa-miR-4656 |
ctacagCAGCCCAatcttc |
2 |
UGGGCUGA | m7a | Disrupted | -0.174000 | no TS | No effect |
hsa-miR-4674 |
ctacagcAGCCCAatcttc |
4 |
CUGGGCUC | m6b | Disrupted | -0.507000 | -0.370000 |
0.040000 |
hsa-miR-4675 |
ctacagCAGCCCaatcttc |
2 |
GGGGCUGU | m6b | Disrupted | -0.173000 | no TS |
0.020000 |
hsa-miR-4741 |
ctacagCAGCCCaatcttc |
2 |
CGGGCUGU | m6b | Disrupted | -0.176000 | no TS |
0.350000 |
hsa-miR-5001-5p |
ctacagCAGCCCaatcttc |
2 |
AGGGCUGG | m6b | Disrupted | -0.157000 | no TS | No effect |
hsa-miR-762 |
ctacagCAGCCCaatcttc |
2 |
GGGGCUGG | m6b | Disrupted | -0.143000 | no TS |
-0.110000 |
hsa-miR-1587 |
ctacagCAGCCCAAtcttc |
0 | UUGGGCUG | m8a | Disrupted | -0.49 | -0.127 |
0.11 |
hsa-miR-370 |
ctaCAGCAGGCcaatcttc |
0 | GCCUGCUG | m8a | Created | no TS | -0.177 |
-9.55 |
hsa-miR-4492 |
ctacagCAGCCCaatcttc |
0 | GGGGCUGG | m6b | Disrupted | -0.143 | no TS | No effect |
hsa-miR-4498 |
ctacagCAGCCCAatcttc |
0 | UGGGCUGG | m7a | Disrupted | -0.157 | no TS |
0.14 |
hsa-miR-4656 |
ctacagCAGCCCAatcttc |
0 | UGGGCUGA | m7a | Disrupted | -0.174 | no TS | No effect |
hsa-miR-4674 |
ctacagcAGCCCAatcttc |
0 | CUGGGCUC | m6b | Disrupted | -0.507 | -0.37 |
0.04 |
hsa-miR-4675 |
ctacagCAGCCCaatcttc |
0 | GGGGCUGU | m6b | Disrupted | -0.173 | no TS |
0.02 |
hsa-miR-4741 |
ctacagCAGCCCaatcttc |
0 | CGGGCUGU | m6b | Disrupted | -0.176 | no TS |
0.35 |
hsa-miR-5001-5p |
ctacagCAGCCCaatcttc |
0 | AGGGCUGG | m6b | Disrupted | -0.157 | no TS | No effect |
hsa-miR-762 |
ctacagCAGCCCaatcttc |
0 | GGGGCUGG | m6b | Disrupted | -0.143 | no TS |
-0.11 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.37760826T>C | ICGC_BD90E4D2-2A78-11E2-BDED-1EFD496BB9B8 | CPCG_0103_Pr_P_P4 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.37761131T>G | COSN1103892 | HCC24T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.37761238A>T | COSN1444781 | RK092_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1304-3p |
tttcCAGTGAGtccagtca |
1 |
UCUCACUG | m7b | Disrupted | -0.141000 | no TS |
0.010000 |
hsa-miR-3680-5p |
tttccAGTGAGTCcagtca |
1 |
GACUCACU | m8a | Disrupted | -0.109000 | no TS |
0.230000 |
hsa-miR-378a-3p |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
-0.040000 |
hsa-miR-378b |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.159000 | no TS |
-0.060000 |
hsa-miR-378c |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
-0.070000 |
hsa-miR-378d |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
-0.050000 |
hsa-miR-378e |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
-0.070000 |
hsa-miR-378f |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
-0.060000 |
hsa-miR-378h |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
0.816000 |
hsa-miR-378i |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.141000 | no TS |
1.130000 |
hsa-miR-422a |
tttccagtgAGTCCAGTca |
2 |
ACUGGACU | m8a | (m8a->m7a) | -0.150000 | no TS |
0.450000 |
hsa-miR-4638-3p |
tttccagtgTGTCCAGtca |
0 | CCUGGACA | m7b | (m6b->m7b) | no TS | -0.148000 |
-5.330000 |
hsa-miR-603 |
tttccAGTGTGTccagtca |
1 |
CACACACU | m7b | Created | -0.150000 | -0.233000 |
-1.570000 |
hsa-miR-1304-3p |
tttcCAGTGAGtccagtca |
0 | UCUCACUG | m7b | Disrupted | -0.141 | no TS |
0.01 |
hsa-miR-3680-5p |
tttccAGTGAGTCcagtca |
0 | GACUCACU | m8a | Disrupted | -0.109 | no TS |
0.23 |
hsa-miR-378a-3p |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
-0.04 |
hsa-miR-378b |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.159 | no TS |
-0.06 |
hsa-miR-378c |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
-0.07 |
hsa-miR-378d |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
-0.05 |
hsa-miR-378e |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
-0.07 |
hsa-miR-378f |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
-0.06 |
hsa-miR-378h |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
0.816 |
hsa-miR-378i |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.141 | no TS |
1.13 |
hsa-miR-422a |
tttccagtgAGTCCAGTca |
0 | ACUGGACU | m8a | (m8a->m7a) | -0.15 | no TS |
0.45 |
hsa-miR-4638-3p |
tttccagtgTGTCCAGtca |
0 | CCUGGACA | m7b | (m6b->m7b) | no TS | -0.148 |
-5.33 |
hsa-miR-603 |
tttccAGTGTGTccagtca |
0 | CACACACU | m7b | Created | -0.15 | -0.233 |
-1.57 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.37761304G>A | COSN8862242 | SNUH_G10_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |