SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_001099439
Gene Symbol:	EPHA10
Description:	Homo sapiens EPH receptor A10 (EPHA10), transcript variant 3, mRNA.
Gene Location:	chr1(-):38181645-38230824
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.37717418G>A			COSN10048138		C0038T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.37718248C>T			COSN7218872		8067242		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-296-5p	gcttGGGCCCagatctggt	4	AGGGCCCC	m6b	Disrupted	-0.670000	-0.466000	2.050000
hsa-miR-3187-5p	gcttggGCCCAGatctggt	0	CCUGGGCA	m6b	Disrupted	-0.236000	-0.096000	4.190000
hsa-miR-378g	gcttggGCCCAGatctggt	0	ACUGGGCU	m6b	Disrupted	-0.355000	-0.204000	0.660000
hsa-miR-4486	gcttggGCCCAGatctggt	0	GCUGGGCG	m6b	Disrupted	-0.254000	-0.089000	4.470000
hsa-miR-4747-3p	gcttGGGCCTagatctggt	3	AAGGCCCG	m6b	Created	-0.176000	-0.397000	-7.360000
hsa-miR-612	gcttggGCCCAGatctggt	0	GCUGGGCA	m6b	Disrupted	-0.191000	-0.054000	1.550000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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