SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001430
Gene Symbol: EPAS1
Description: Homo sapiens endothelial PAS domain protein 1 (EPAS1), mRNA.
Gene Location: chr2(+):46524540-46613842
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.46385585C>T COSN8769711 SS6003119 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.46386383C>T COSN14607258 8012342 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3941 atggtgtTGTGTAAatcat
 0 UUACACAC m7a Created no TS -0.059000 -1.050000
hsa-miR-466 atggtgtTGTGTAaatcat
 0 AUACACAU m6b Created no TS -0.055000 -0.150000
hsa-miR-4672 atggtgtTGTGTAAatcat
 0 UUACACAG m7a Created no TS -0.058000 -1.100000
hsa-miR-4731-3p atggtgTTGTGTaaatcat
 0 CACACAAG m6b Created no TS -0.060000 -0.310000
hsa-miR-4801 atggtgTTGTGTAaatcat
 0 UACACAAG m7a Created no TS -0.070000 No effect
hsa-miR-5003-5p atggTGTTGTGtaaatcat
 2
 UCACAACA m7b Created -0.011000 -0.153000 -0.100000
hsa-miR-3941 atggtgtTGTGTAAatcat
 0 UUACACAC m7a Created no TS -0.059000 -1.050000
hsa-miR-466 atggtgtTGTGTAaatcat
 0 AUACACAU m6b Created no TS -0.055000 -0.150000
hsa-miR-4672 atggtgtTGTGTAAatcat
 0 UUACACAG m7a Created no TS -0.058000 -1.100000
hsa-miR-4731-3p atggtgTTGTGTaaatcat
 0 CACACAAG m6b Created no TS -0.060000 -0.310000
hsa-miR-4801 atggtgTTGTGTAaatcat
 0 UACACAAG m7a Created no TS -0.070000 No effect
hsa-miR-5003-5p atggTGTTGTGtaaatcat
 2
 UCACAACA m7b Created -0.011000 -0.153000 -0.100000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.46386449C>G COSN8609262 360_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4797-3p ggtTACTGAGgtgtaaatg
 0 UCUCAGUA m7b (m6b->m7b) no TS -0.135000 -0.500000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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