SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001165962 |
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Gene Symbol: | ELAC2 |
Description: | Homo sapiens elaC homolog 2 (E. coli) (ELAC2), transcript variant 3, mRNA. |
Gene Location: | chr17(-):12894928-12921381 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.12992352G>T | COSN6650610 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3194-3p |
tgctaCAGAGCagggtctg |
2 |
AGCUCUGC | m6b | Disrupted | -0.058000 | no TS | No effect |
hsa-miR-5691 |
tgctaCAGAGCAgggtctg |
2 |
UUGCUCUG | m7b | Disrupted | -0.080000 | no TS |
0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.12992612C>T | COSN6650611 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.12992667C>G | COSN6650612 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3649 |
aggcttggGGTCCCacata |
0 | AGGGACCU | m6b | Created | no TS | -0.199000 |
-1.370000 |
hsa-miR-4648 |
aggcttgggGTCCCACAta |
0 | UGUGGGAC | m8a | (m7a->m8a) | -0.153000 | -0.382000 |
-6.100000 |
hsa-miR-505-5p |
aggcttgGGCTCCCacata |
1 |
GGGAGCCA | m7a | Disrupted | -0.179000 | -0.179000 |
1.450000 |
hsa-miR-711 |
aggcttgGGGTCCCacata |
0 | GGGACCCA | m7a | Created | NA | NA |
-2.740000 |
hsa-miR-920 |
aggcttggGCTCCCacata |
2 |
GGGGAGCU | m6b | Disrupted | -0.316000 | -0.124000 |
3.410000 |