SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001417 |
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Gene Symbol: | EIF4B |
Description: | Homo sapiens eukaryotic translation initiation factor 4B (EIF4B), mRNA. |
Gene Location: | chr12(+):53400061-53435993 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.53040801A>T | COSN1576384 | RK091_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.53041775T>A | COSN5186134 | SS6003312 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-555 |
aatataatTTACCCagtgg |
4 |
AGGGUAAG | m6b | Disrupted | -0.115000 | no TS |
0.150000 |
hsa-miR-944 |
aatATAATTTacccagtgg |
6 |
AAAUUAUU | m7a | (m7a->m6a) | 0.035000 | 0.119000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.53041841G>T | 9_19680 | CRC-3-Tumor | Colorectal adenocarcinoma | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.53042048G>C | COSN9563506 | AOCS-148-1-4 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |