| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_201283 |
|---|---|
| Gene Symbol: | EGFR |
| Description: | Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA. |
| Gene Location: | chr7(+):55086724-55224644 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr7:g.55156865G>T | cosmic_v64_1760529 | Leukemia/T-ALL | ||||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-130a-5p |
atataAATGTGAAatcagt |
0 | UUCACAUU | m8a | Created | no TS | -0.328 | No effect |
| hsa-miR-205-3p |
atataaatgTGAAATCagt |
0 | GAUUUCAG | m7a | (m6b->m7a) | -0.173 | -0.173 |
2.92 |
| hsa-miR-23a-3p |
atataAATGTGAaatcagt |
0 | AUCACAUU | m7b | Created | no TS | -0.318 |
-1.41 |
| hsa-miR-23b-3p |
atataAATGTGAaatcagt |
0 | AUCACAUU | m7b | Created | no TS | -0.318 |
-1.41 |
| hsa-miR-23c |
atataAATGTGAaatcagt |
0 | AUCACAUU | m7b | Created | no TS | -0.349 |
-4.81 |