| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001242766 |
|---|---|
| Gene Symbol: | DLGAP1 |
| Description: | Homo sapiens discs, large (Drosophila) homolog-associated protein 1 (DLGAP1), transcript variant 2, mRNA. |
| Gene Location: | chr18(-):3496029-3845358 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr18:g.3496079T>A | COSN6120868 | RK181_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3115 |
atgaatgttACCCATAatg |
20 |
AUAUGGGU | m7b | (m6b->m7b) | -0.212000 | -0.491000 |
-0.010000 |
| hsa-miR-3143 |
atgAATGTTAcccataatg |
0 | AUAACAUU | m7b | (m6c->m7b) | no TS | -0.052000 |
-0.560000 |
| hsa-miR-3153 |
atgaatgTTTCCCataatg |
22 |
GGGGAAAG | m6b | Disrupted | -0.155000 | no TS | No effect |
| hsa-miR-4261 |
atgaaTGTTTCCcataatg |
20 |
AGGAAACA | m7b | Disrupted | -0.663000 | -0.439000 |
0.090000 |
| hsa-miR-4668-5p |
atgaatgTTTCCCataatg |
22 |
AGGGAAAA | m6b | Disrupted | -0.153000 | no TS | No effect |
| hsa-miR-494 |
atgaATGTTTCccataatg |
18 |
UGAAACAU | m7b | Disrupted | -0.279000 | -0.148000 |
0.010000 |
| hsa-miR-543 |
atGAATGTTTcccataatg |
15 |
AAACAUUC | m8a | (m8a->m7b) | -0.154000 | -0.250000 |
-0.110000 |
| hsa-miR-555 |
atgaatgTTACCCataatg |
0 | AGGGUAAG | m6b | Created | no TS | -0.213000 |
-0.060000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr18:g.3496707T>A | COSN14836253 | LP6005334-DNA_C03 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-379-3p |
tttGTTACATtgttctttt |
12 |
UAUGUAAC | m7b | (m7b->m6c) | -0.098000 | no TS |
0.150000 |
| hsa-miR-411-3p |
tttGTTACATtgttctttt |
12 |
UAUGUAAC | m7b | (m7b->m6c) | -0.098000 | no TS |
0.150000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr18:g.3498673C>T | COSN1205475 | HCC113T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3978 |
cactttaTTTCCAacctca |
0 | GUGGAAAG | m6b | Created | no TS | -0.015000 |
-0.980000 |
| hsa-miR-4425 |
cactttatTCCCAACctca |
2 |
UGUUGGGA | m7b | Disrupted | -0.200000 | no TS |
0.390000 |
| hsa-miR-5093 |
cactttATTTCCaacctca |
0 | AGGAAAUG | m6b | Created | no TS | -0.012000 |
0.300000 |
| hsa-miR-92a-1-5p |
cactttattCCCAACCTca |
2 |
AGGUUGGG | m8a | (m8a->m7a) | -0.254000 | no TS |
2.800000 |
| hsa-miR-3978 |
cactttaTTTCCAacctca |
0 | GUGGAAAG | m6b | Created | no TS | -0.015 |
-0.98 |
| hsa-miR-4425 |
cactttatTCCCAACctca |
0 | UGUUGGGA | m7b | Disrupted | -0.2 | no TS |
0.39 |
| hsa-miR-5093 |
cactttATTTCCaacctca |
0 | AGGAAAUG | m6b | Created | no TS | -0.012 |
0.3 |
| hsa-miR-92a-1-5p |
cactttattCCCAACCTca |
0 | AGGUUGGG | m8a | (m8a->m7a) | -0.254 | no TS |
2.8 |