| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| RefSeq ID: | NM_001164552 |
|---|---|
| Gene Symbol: | DISC1 |
| Description: | Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript variant Lv, mRNA. |
| Gene Location: | chr1(+):231762560-231859820 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.231722748C>T | 0_5 | Melanoma | ||||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4311 |
attcctcTCTCTTTtaaca |
6 |
GAAAGAGA | m7b | Created | no TS | -0.09 |
-0.29 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.231722996C>T | ICGC_ssm_v3_143946 | HCC78T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3667-5p |
cttcggaGGTCTTTaggac |
0 | AAAGACCC | m7a | Created | NA | NA |
-1.1 |
| hsa-miR-4484 |
cttcggagGCCTTTaggac |
0 | AAAAGGCG | m6b | Disrupted | -0.1 | no TS |
0.21 |
| hsa-miR-4509 |
cttcggaggCCTTTAGgac |
0 | ACUAAAGG | m7b | (m7b->m6c) | -0.13 | -0.052 |
0.19 |
| hsa-miR-4744 |
cttcggaggTCTTTAGgac |
0 | UCUAAAGA | m7b | (m6c->m7b) | -0.21 | -0.215 |
-0.1 |
| hsa-miR-548an |
cttcggagGCCTTTaggac |
0 | AAAAGGCA | m6b | Disrupted | -0.058 | no TS |
0.03 |
| hsa-miR-548ao-3p |
cttcggaGGTCTTTaggac |
0 | AAAGACCG | m7a | Created | NA | NA | No effect |
| hsa-miR-548u |
cttcggagGTCTTTaggac |
0 | CAAAGACU | m6b | Created | no TS | -0.011 | No effect |