SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_004938
Gene Symbol: DAPK1
Description: Homo sapiens death-associated protein kinase 1 (DAPK1), mRNA.
Gene Location: chr9(+):90112755-90323549
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.87707766C>G COSN14443264 8015277 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1261 atatTTATCCAaaatgtgt
 5
 AUGGAUAA m7b Disrupted -0.301000 no TS 0.010000
hsa-miR-5004-3p atatttATCCAAaatgtgt
 7
 CUUGGAUU m6b Disrupted -0.103000 no TS 0.260000
hsa-miR-1261 atatTTATCCAaaatgtgt
 5
 AUGGAUAA m7b Disrupted -0.301000 no TS 0.010000
hsa-miR-5004-3p atatttATCCAAaatgtgt
 7
 CUUGGAUU m6b Disrupted -0.103000 no TS 0.260000

Mutation Mutation ID Sample Name Cancer Type
chr9:g.87707910G>T COSN9318831 J6_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-877-3p tgcaGAAGAGGgtgtgttt
 17
 UCCUCUUC m7b Disrupted -0.099000 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr9:g.87708619G>T COSN9318832 3030_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4709-5p aaataaACTGTTGctcgtt
 0 ACAACAGU m7b Disrupted -0.234000 no TS No effect
hsa-miR-548aj-5p aaataaaCTTTTGCtcgtt
 17
 UGCAAAAG m7b Created -0.065000 -0.280000 -0.040000
hsa-miR-548g-5p aaataaaCTTTTGCtcgtt
 17
 UGCAAAAG m7b Created -0.065000 -0.280000 -0.040000
hsa-miR-548p aaataaacTTTTGCTcgtt
 2
 UAGCAAAA m7b Created -0.138000 -0.252000 -0.010000
hsa-miR-548x-5p aaataaaCTTTTGCtcgtt
 17
 UGCAAAAG m7b Created -0.065000 -0.280000 -0.040000
hsa-miR-561-3p aaatAAACTTTtgctcgtt
 0 CAAAGUUU m7b Created no TS -0.114000 -0.010000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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