SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001340 |
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Gene Symbol: | CYLC2 |
Description: | Homo sapiens cylicin, basic protein of sperm head cytoskeleton 2 (CYLC2), mRNA. |
Gene Location: | chr9(+):105757592-105780770 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr9:g.103005819A>T | ICGC_sm402819 | RK100_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3713 |
aagaaGGATACaaaggaga |
0 | GGUAUCCG | m6b | Disrupted | -0.192 | no TS |
0.09 |
hsa-miR-500a-5p |
aagAAGGATTcaaaggaga |
0 | UAAUCCUU | m7b | (m6b->m7b) | -0.118 | -0.268 | No effect |