SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_020943
Gene Symbol: CWC22
Description: Homo sapiens CWC22 spliceosome-associated protein homolog (S. cerevisiae) (CWC22), mRNA.
Gene Location: chr2(-):180809603-180871780
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.179944906A>G COSN1809171 RK159_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-300 gtctcgCTTGTATtttgtg
11
UAUACAAG m7b Created -0.325000 -0.476000 -2.220000
hsa-miR-381 gtctcgCTTGTATtttgtg
11
UAUACAAG m7b Created -0.325000 -0.429000 -0.010000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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