SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_033427 |
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Gene Symbol: | CTTNBP2 |
Description: | Homo sapiens cortactin binding protein 2 (CTTNBP2), mRNA. |
Gene Location: | chr7(-):117350705-117513561 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.117710847C>A | COSN1341185 | HX9T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3658 |
tctTTCTTAAAaaagtttt |
0 | UUUAAGAA | m8a | Created | no TS | -0.176000 |
-0.020000 |
hsa-miR-3658 |
tctTTCTTAAAaaagtttt |
0 | UUUAAGAA | m8a | Created | no TS | -0.176 |
-0.02 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.117710947G>A | COSN9314170 | 8031157 | [pancreas][NS][carcinoid-endocrine_tumour][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-224-3p |
ggttacattACCATTTggt |
0 | AAAAUGGU | m7b | (m6b->m7b) | no TS | -0.123000 |
-0.190000 |
hsa-miR-5197-5p |
ggttacatTGCCATTtggt |
3 |
CAAUGGCA | m7b | Disrupted | -0.195000 | no TS |
4.450000 |
hsa-miR-522-3p |
ggttacattACCATTTggt |
0 | AAAAUGGU | m7b | (m6b->m7b) | no TS | -0.123000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.117711230T>C | COSN7651715 | PCSI_0082_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-101-3p |
agaactgtGTACTGTAtat |
0 | UACAGUAC | m8a | Disrupted | -0.313000 | no TS |
0.310000 |
hsa-miR-148a-3p |
agaactgTGCACTGtatat |
0 | UCAGUGCA | m7b | Created | no TS | -0.218000 |
-1.280000 |
hsa-miR-148b-3p |
agaactgTGCACTGtatat |
0 | UCAGUGCA | m7b | Created | no TS | -0.218000 |
-0.780000 |
hsa-miR-152 |
agaactgTGCACTGtatat |
0 | UCAGUGCA | m7b | Created | no TS | -0.218000 |
-1.250000 |
hsa-miR-3681-3p |
agaACTGTGTactgtatat |
0 | ACACAGUG | m7a | (m7a->m6b) | NA | NA |
-0.830000 |
hsa-miR-4672 |
agaaCTGTGTActgtatat |
0 | UUACACAG | m7b | Disrupted | -0.168000 | no TS |
9.290000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.117711387A>T | COSN2195141 | RK015_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-181a-5p |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
1.510000 |
hsa-miR-181b-5p |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
4.270000 |
hsa-miR-181c-5p |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
1.490000 |
hsa-miR-181d |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
0.780000 |
hsa-miR-4262 |
tttgtaaaGAATGTattta |
14 |
GACAUUCA | m6b | Disrupted | -0.107000 | no TS |
0.400000 |
hsa-miR-181a-5p |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
1.510000 |
hsa-miR-181b-5p |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
4.270000 |
hsa-miR-181c-5p |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
1.490000 |
hsa-miR-181d |
tttgtaaaGAATGTattta |
14 |
AACAUUCA | m6b | Disrupted | -0.097000 | no TS |
0.780000 |
hsa-miR-4262 |
tttgtaaaGAATGTattta |
14 |
GACAUUCA | m6b | Disrupted | -0.107000 | no TS |
0.400000 |
hsa-miR-181a-5p |
tttgtaaaGAATGTattta |
0 | AACAUUCA | m6b | Disrupted | -0.097 | no TS |
1.51 |
hsa-miR-181b-5p |
tttgtaaaGAATGTattta |
0 | AACAUUCA | m6b | Disrupted | -0.097 | no TS |
4.27 |
hsa-miR-181c-5p |
tttgtaaaGAATGTattta |
0 | AACAUUCA | m6b | Disrupted | -0.097 | no TS |
1.49 |
hsa-miR-181d |
tttgtaaaGAATGTattta |
0 | AACAUUCA | m6b | Disrupted | -0.097 | no TS |
0.78 |
hsa-miR-4262 |
tttgtaaaGAATGTattta |
0 | GACAUUCA | m6b | Disrupted | -0.107 | no TS |
0.4 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr7:g.117711477C>A | COSN9823417 | AOCS-125-1-2 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-129-5p |
caaggaCAAAAAGatacaa |
1 |
CUUUUUGC | m7a | Created | -0.046000 | -0.046000 |
0.010000 |