SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_033427
Gene Symbol: CTTNBP2
Description: Homo sapiens cortactin binding protein 2 (CTTNBP2), mRNA.
Gene Location: chr7(-):117350705-117513561
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr7:g.117710847C>A COSN1341185 HX9T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3658 tctTTCTTAAAaaagtttt
0 UUUAAGAA m8a Created no TS -0.176000 -0.020000
hsa-miR-3658 tctTTCTTAAAaaagtttt
0 UUUAAGAA m8a Created no TS -0.176 -0.02

Mutation Mutation ID Sample Name Cancer Type
chr7:g.117710947G>A COSN9314170 8031157 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-224-3p ggttacattACCATTTggt
0 AAAAUGGU m7b (m6b->m7b) no TS -0.123000 -0.190000
hsa-miR-5197-5p ggttacatTGCCATTtggt
3
CAAUGGCA m7b Disrupted -0.195000 no TS 4.450000
hsa-miR-522-3p ggttacattACCATTTggt
0 AAAAUGGU m7b (m6b->m7b) no TS -0.123000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr7:g.117711230T>C COSN7651715 PCSI_0082_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-101-3p agaactgtGTACTGTAtat
0 UACAGUAC m8a Disrupted -0.313000 no TS 0.310000
hsa-miR-148a-3p agaactgTGCACTGtatat
0 UCAGUGCA m7b Created no TS -0.218000 -1.280000
hsa-miR-148b-3p agaactgTGCACTGtatat
0 UCAGUGCA m7b Created no TS -0.218000 -0.780000
hsa-miR-152 agaactgTGCACTGtatat
0 UCAGUGCA m7b Created no TS -0.218000 -1.250000
hsa-miR-3681-3p agaACTGTGTactgtatat
0 ACACAGUG m7a (m7a->m6b) NA NA -0.830000
hsa-miR-4672 agaaCTGTGTActgtatat
0 UUACACAG m7b Disrupted -0.168000 no TS 9.290000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.117711387A>T COSN2195141 RK015_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-181a-5p tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 1.510000
hsa-miR-181b-5p tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 4.270000
hsa-miR-181c-5p tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 1.490000
hsa-miR-181d tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 0.780000
hsa-miR-4262 tttgtaaaGAATGTattta
14
GACAUUCA m6b Disrupted -0.107000 no TS 0.400000
hsa-miR-181a-5p tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 1.510000
hsa-miR-181b-5p tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 4.270000
hsa-miR-181c-5p tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 1.490000
hsa-miR-181d tttgtaaaGAATGTattta
14
AACAUUCA m6b Disrupted -0.097000 no TS 0.780000
hsa-miR-4262 tttgtaaaGAATGTattta
14
GACAUUCA m6b Disrupted -0.107000 no TS 0.400000
hsa-miR-181a-5p tttgtaaaGAATGTattta
0 AACAUUCA m6b Disrupted -0.097 no TS 1.51
hsa-miR-181b-5p tttgtaaaGAATGTattta
0 AACAUUCA m6b Disrupted -0.097 no TS 4.27
hsa-miR-181c-5p tttgtaaaGAATGTattta
0 AACAUUCA m6b Disrupted -0.097 no TS 1.49
hsa-miR-181d tttgtaaaGAATGTattta
0 AACAUUCA m6b Disrupted -0.097 no TS 0.78
hsa-miR-4262 tttgtaaaGAATGTattta
0 GACAUUCA m6b Disrupted -0.107 no TS 0.4

Mutation Mutation ID Sample Name Cancer Type
chr7:g.117711477C>A COSN9823417 AOCS-125-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-129-5p caaggaCAAAAAGatacaa
1
CUUUUUGC m7a Created -0.046000 -0.046000 0.010000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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