SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001164883
Gene Symbol: CTNNA2
Description: Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2), transcript variant 2, mRNA.
Gene Location: chr2(+):79740059-80875988
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.80647882T>G COSN4995116 SS6003113 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-454-5p gacGATAGGGTttaacaag
 0 ACCCUAUC m8a Created no TS 0.000000 No effect
hsa-miR-548aa gacgataGGTTTTaacaag
 0 AAAAACCA m6b Disrupted 0.000000 no TS No effect
hsa-miR-548ap-3p gacgataGGTTTTaacaag
 0 AAAAACCA m6b Disrupted 0.000000 no TS No effect
hsa-miR-548as-3p gacgataGGTTTTAacaag
 0 UAAAACCC m7a Disrupted 0.000000 no TS No effect
hsa-miR-548at-3p gacgataGGTTTTaacaag
 0 CAAAACCG m6b Disrupted 0.000000 no TS No effect
hsa-miR-548t-3p gacgataGGTTTTaacaag
 0 AAAAACCA m6b Disrupted 0.000000 no TS No effect
hsa-miR-652-5p gacgaTAGGGTTtaacaag
 0 CAACCCUA m7b Created no TS 0.000000 No effect


Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648003T>A COSN14515399 8069453 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648114A>T COSN5959599 RK215_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3123 aacATTCTCTtaaaattgg
 0 CAGAGAAU m7b (m6b->m7b) no TS -0.088000 No effect
hsa-miR-3658 aacattcTCTTAAAattgg
 0 UUUAAGAA m7a Created no TS 0.000000 -0.010000
hsa-miR-3925-5p aacaTTCTCTTaaaattgg
 0 AAGAGAAC m7a Created NA NA No effect
hsa-miR-4712-3p aacatTCTCATaaaattgg
 12
 AAUGAGAG m6b Disrupted -0.088000 no TS -0.010000
hsa-miR-580 aacATTCTCAtaaaattgg
 12
 UUGAGAAU m7b (m7b->m6b) -0.093000 no TS -2.980000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648224A>C COSN14943820 LP6005409-DNA_G03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4714-3p agaatcatTAGGTTGGcag
 22
 CCAACCUA m8a Disrupted -0.166000 no TS 7.210000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648285G>T COSN8609681 202_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-300 ataaaaCTTGTATtgcttc
 17
 UAUACAAG m7b Disrupted -0.107000 no TS 4.450000
hsa-miR-381 ataaaaCTTGTATtgcttc
 17
 UAUACAAG m7b Disrupted -0.107000 no TS 2.550000
hsa-miR-548at-5p ataaAACTTTTattgcttc
 0 AAAAGUUA m7a Created NA NA -1.030000
hsa-miR-548n ataaaACTTTTattgcttc
 0 CAAAAGUA m6b Created no TS 0.016000 -0.370000
hsa-miR-548t-5p ataaaACTTTTattgcttc
 0 CAAAAGUG m6b Created no TS 0.008000 -0.040000
hsa-miR-561-3p ataAAACTTTtattgcttc
 0 CAAAGUUU m7b (m6b->m7b) no TS -0.071000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648297T>C COSN6684859 CHC197T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-298 ttgCTTCTGCTtcagtgca
 0 AGCAGAAG m8a Created no TS -0.151000 -1.220000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648325C>T COSN14625383 8062296 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1279 tagcCAATATGcttaagtg
 0 UCAUAUUG m7b Created no TS -0.013000 -0.170000
hsa-miR-4503 tagccaataTGCTTAAgtg
 0 UUUAAGCA m7b (m6c->m7b) no TS -0.121000 -0.390000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648326G>A COSN8609682 304_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-223-5p agccAATACACttaagtgt
 0 CGUGUAUU m7b Created no TS -0.056000 No effect
hsa-miR-595 agccaatACACTTaagtgt
 0 GAAGUGUG m6b Created no TS -0.059000 No effect


Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648439T>G COSN5511888 RK060_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648439T>C COSN8609683 2553_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3185 atgCTTCTTCTaatctgca
 0 AGAAGAAG m8a Created no TS -0.102000 -2.680000
hsa-miR-5197-3p atgctTCTTCTaatctgca
 0 AAGAAGAG m6b Created -0.186000 -0.210000 -0.200000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648583T>G COSN14907435 LP6005409-DNA_F02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-451b tgaccaaTCTTGCTttcat
 0 UAGCAAGA m7b Disrupted -0.201000 no TS 6.680000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648607A>T COSN6421061 HX12T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3671 tttctttttTATTTGAacc
 7
 AUCAAAUA m7b (m6c->m7b) -0.026000 -0.163000 -0.460000
hsa-miR-5692a tttcttttTTATTTGaacc
 0 CAAAUAAU m7a Created NA NA No effect

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648609T>A COSN1243149 HX12T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-32-3p tcttttTAAATTGaaccat
 0 CAAUUUAG m7a Created NA NA -0.080000
hsa-miR-3671 tctttttaATTTGAaccat
 7
 AUCAAAUA m6b Disrupted -0.026000 -0.019000 0.020000
hsa-miR-607 tctttttaATTTGAACcat
 6
 GUUCAAAU m8a Disrupted -0.050000 no TS 0.040000
hsa-miR-32-3p tcttttTAAATTGaaccat
 0 CAAUUUAG m7a Created NA NA -0.08
hsa-miR-3671 tctttttaATTTGAaccat
 0 AUCAAAUA m6b Disrupted -0.026 -0.019 0.02
hsa-miR-607 tctttttaATTTGAACcat
 0 GUUCAAAU m8a Disrupted -0.05 no TS 0.04

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648642C>A COSN14843285 8058333 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1255b-2-3p tagaaggccAAGTGGTgga
 0 AACCACUU m7b (m6c->m7b) no TS -0.109000 -0.020000
hsa-miR-2861 tagaAGGCCCagtggtgga
 9
 GGGGCCUG m6b Disrupted -0.190000 no TS 11.550000
hsa-miR-3614-5p tagaaggCCAAGTGGtgga
 0 CCACUUGG m8a Created no TS -0.127000 -4.500000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648698T>C COSN1858511 RK133_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3924 agaggcaaATACATAggtg
 9
 AUAUGUAU m7b Disrupted -0.060000 no TS No effect
hsa-miR-3924 agaggcaaATACATAggtg
 0 AUAUGUAU m7b Disrupted -0.06 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr2:g.80648846T>C COSN15271684 SM-4B295 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3605-5p agcatCATCCTCctgaaaa
 0 UGAGGAUG m7b Created no TS -0.273000 -2.760000
hsa-miR-4433-3p agcatcatcCTCCTGaaaa
 0 ACAGGAGU m6b Created no TS -0.190000 -4.530000
hsa-miR-4459 agcatcatCCTCCTGaaaa
 0 CCAGGAGG m7b Created no TS -0.488000 -0.030000
hsa-miR-4476 agcatcatCTTCCTGaaaa
 0 CAGGAAGG m7a Disrupted NA NA 0.040000
hsa-miR-4695-5p agcatcatCCTCCTGaaaa
 0 CAGGAGGC m7a Created NA NA No effect
hsa-miR-4768-3p agcatcatcCTCCTGaaaa
 0 CCAGGAGA m6b Created no TS -0.180000 -5.250000
hsa-miR-873-5p agcatcatcTTCCTGaaaa
 2
 GCAGGAAC m6b Disrupted -0.164000 no TS 1.240000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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