SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000096
Gene Symbol: CP
Description: Homo sapiens ceruloplasmin (ferroxidase) (CP), mRNA.
Gene Location: chr3(-):148890289-148939832
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.149172612T>A COSN1920901 RK027_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1273e ttTCAAGCAAacttgtaaa
 5
 UUGCUUGA m8a (m7b->m8a) -0.239000 -0.386000 -1.980000
hsa-miR-1273e ttTCAAGCAAacttgtaaa
 5
 UUGCUUGA m8a (m7b->m8a) -0.239000 -0.386000 -1.980000
hsa-miR-1273e ttTCAAGCAAacttgtaaa
 0 UUGCUUGA m8a (m7b->m8a) -0.239 -0.386 -1.98

Mutation Mutation ID Sample Name Cancer Type
chr3:g.149173374A>G COSN1920903 RK165_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-132-3p aggaacACTGTTAaggttc
 0 UAACAGUC m7a Created no TS -0.061000 -0.810000
hsa-miR-212-3p aggaacACTGTTAaggttc
 0 UAACAGUC m7a Created no TS -0.061000 -0.070000
hsa-miR-4255 agGAACACTGttaaggttc
 2
 CAGUGUUC m8a (m7b->m8a) -0.283000 -0.141000 0.080000
hsa-miR-633 aggaacACTATTAaggttc
 4
 CUAAUAGU m7b Disrupted -0.396000 -0.299000 No effect
hsa-miR-132-3p aggaacACTGTTAaggttc
 0 UAACAGUC m7a Created no TS -0.061000 -0.810000
hsa-miR-212-3p aggaacACTGTTAaggttc
 0 UAACAGUC m7a Created no TS -0.061000 -0.070000
hsa-miR-4255 agGAACACTGttaaggttc
 2
 CAGUGUUC m8a (m7b->m8a) -0.283000 -0.141000 0.080000
hsa-miR-633 aggaacACTATTAaggttc
 4
 CUAAUAGU m7b Disrupted -0.396000 -0.299000 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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