SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000095
Gene Symbol: COMP
Description: Homo sapiens cartilage oligomeric matrix protein (COMP), mRNA.
Gene Location: chr19(-):18893582-18902114
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.18782872C>T COSN15335136 0094_CRUK_PC_0094_T1_DNA [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3648 ccctcaCCGCGGCTggatg
 1
 AGCCGCGG m8a Disrupted -0.344000 no TS 2.580000
hsa-miR-4691-3p ccctcaccGTGGCTGGatg
 0 CCAGCCAC m8a Created no TS -0.158000 -3.310000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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