SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_016343
Gene Symbol: CENPF
Description: Homo sapiens centromere protein F, 350/400kDa (mitosin) (CENPF), mRNA.
Gene Location: chr1(+):214776531-214837914
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.214664148C>G COSN7468644 tumor_4163639 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3185 tttaTTCTTCTaattaaca
 0 AGAAGAAG m7a Disrupted NA NA 0.010000
hsa-miR-5197-3p tttatTCTTCTaattaaca
 1
 AAGAAGAG m6b Disrupted -0.086000 no TS 0.040000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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