SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_001238
Gene Symbol: CCNE1
Description: Homo sapiens cyclin E1 (CCNE1), mRNA.
Gene Location: chr19(+):30302900-30315215
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr19:g.29823920G>T COSN8605557 3006_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3913-3p ctgtgGATGTCatcaaaca
0 AGACAUCA m6b Created no TS -0.145000 -1.740000
hsa-miR-489 ctgtgGATGTCAtcaaaca
0 GUGACAUC m7b Created no TS -0.191000 -5.390000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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