SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001167674 |
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Gene Symbol: | CADM2 |
Description: | Homo sapiens cell adhesion molecule 2 (CADM2), transcript variant 1, mRNA. |
Gene Location: | chr3(+):85008132-86123579 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86066865C>T | COSN8489653 | 2275_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3529-5p |
tcattTCTACCatcgtctg |
8 |
AGGUAGAC | m6b | Disrupted | -0.166000 | no TS | No effect |
hsa-miR-3682-3p |
tcatttcTATCATCgtctg |
0 | UGAUGAUA | m7b | Created | -0.043000 | -0.174000 | No effect |
hsa-miR-4650-3p |
tcatTTCTACCatcgtctg |
7 |
AGGUAGAA | m7b | Disrupted | -0.321000 | 0.069000 |
0.180000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86067199G>A | COSN1969041 | RK209_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3667-3p |
acaggattaAGGAAGGaca |
1 |
ACCUUCCU | m7b | (m6c->m7b) | -0.126000 | -0.330000 |
-0.580000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86067258C>T | COSN8489654 | 3844_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3668 |
taatgtttTCTACATgtct |
7 |
AAUGUAGA | m7b | Disrupted | -0.147000 | no TS | No effect |
hsa-miR-4495 |
taatgtttTTTACATgtct |
3 |
AAUGUAAA | m7b | Created | 0.048000 | -0.006000 |
-0.400000 |
hsa-miR-570-3p |
taaTGTTTTCtacatgtct |
3 |
CGAAAACA | m7b | (m7b->m6b) | 0.206000 | 0.321000 |
0.380000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86067413G>T | COSN8489655 | 304_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1183 |
ttgaTACAGTagccatgtg |
17 |
CACUGUAG | m6b | Created | 0.012000 | -0.021000 | No effect |
hsa-miR-4268 |
ttgatacAGGAGCCatgtg |
0 | GGCUCCUC | m7a | Disrupted | NA | NA | No effect |
hsa-miR-4448 |
ttgatacAGGAGCCatgtg |
0 | GGCUCCUU | m7a | Disrupted | NA | NA | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86067687C>T | COSN7714564 | 8068548 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-33a-3p |
ccaattAAACATTatttga |
14 |
CAAUGUUU | m7b | Disrupted | 0.334000 | 0.339000 |
0.240000 |
hsa-miR-409-3p |
ccaattaAACATTatttga |
7 |
GAAUGUUG | m6b | Disrupted | 0.114000 | 0.101000 | No effect |
hsa-miR-4307 |
ccaattAAACATTatttga |
3 |
AAUGUUUU | m7a | Disrupted | 0.066000 | 0.066000 | No effect |
hsa-miR-5692b |
ccaattaaATATTATTtga |
2 |
AAUAAUAU | m8a | Created | 1.180000 | 1.177000 | No effect |
hsa-miR-5692c |
ccaattaaATATTATTtga |
2 |
AAUAAUAU | m8a | Created | 1.180000 | 1.177000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86067753C>G | COSN1969042 | RK063_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4535 |
attttctaAGGTCCAttat |
0 | GUGGACCU | m7b | Created | no TS | -0.213000 |
-0.700000 |
hsa-miR-492 |
attttctaAGGTCCattat |
0 | AGGACCUG | m6b | Created | no TS | -0.140000 |
-0.250000 |
hsa-miR-659-5p |
attttctAAGGTCCattat |
0 | AGGACCUU | m7b | Created | no TS | -0.308000 |
-0.230000 |
hsa-miR-4535 |
attttctaAGGTCCAttat |
0 | GUGGACCU | m7b | Created | no TS | -0.213000 |
-0.700000 |
hsa-miR-492 |
attttctaAGGTCCattat |
0 | AGGACCUG | m6b | Created | no TS | -0.140000 |
-0.250000 |
hsa-miR-659-5p |
attttctAAGGTCCattat |
0 | AGGACCUU | m7b | Created | no TS | -0.308000 |
-0.230000 |
hsa-miR-4535 |
attttctaAGGTCCAttat |
0 | GUGGACCU | m7b | Created | no TS | -0.213 |
-0.7 |
hsa-miR-492 |
attttctaAGGTCCattat |
0 | AGGACCUG | m6b | Created | no TS | -0.14 |
-0.25 |
hsa-miR-659-5p |
attttctAAGGTCCattat |
0 | AGGACCUU | m7b | Created | no TS | -0.308 |
-0.23 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86067822G>T | COSN8489656 | 2275_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068006A>G | COSN1969043 | RK204_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-30a-3p |
tagtttgCTGAAAatttac |
10 |
CUUUCAGU | m6b | Created | 0.093000 | 0.120000 |
-0.020000 |
hsa-miR-30d-3p |
tagtttgCTGAAAatttac |
10 |
CUUUCAGU | m6b | Created | 0.093000 | 0.120000 |
-0.550000 |
hsa-miR-30e-3p |
tagtttgCTGAAAatttac |
10 |
CUUUCAGU | m6b | Created | 0.089000 | 0.113000 |
-0.020000 |
hsa-miR-374b-3p |
tagttTGCTAAaaatttac |
7 |
CUUAGCAG | m6b | Disrupted | -0.031000 | 0.004000 |
1.240000 |
hsa-miR-4291 |
tagttTGCTGAAaatttac |
0 | UUCAGCAG | m7a | Created | no TS | -0.057000 |
-0.620000 |
hsa-miR-4766-3p |
tagtTTGCTAaaaatttac |
9 |
AUAGCAAU | m6b | Disrupted | 0.127000 | 0.159000 | No effect |
hsa-miR-545-3p |
tagTTTGCTGAaaatttac |
7 |
UCAGCAAA | m8a | Created | -0.094000 | -0.206000 |
-0.280000 |
hsa-miR-548p |
tagTTTGCTAaaaatttac |
8 |
UAGCAAAA | m7a | (m7a->m6a) | 0.032000 | 0.033000 |
0.020000 |
hsa-miR-30a-3p |
tagtttgCTGAAAatttac |
10 |
CUUUCAGU | m6b | Created | 0.093000 | 0.120000 |
-0.020000 |
hsa-miR-30d-3p |
tagtttgCTGAAAatttac |
10 |
CUUUCAGU | m6b | Created | 0.093000 | 0.120000 |
-0.550000 |
hsa-miR-30e-3p |
tagtttgCTGAAAatttac |
10 |
CUUUCAGU | m6b | Created | 0.089000 | 0.113000 |
-0.020000 |
hsa-miR-374b-3p |
tagttTGCTAAaaatttac |
7 |
CUUAGCAG | m6b | Disrupted | -0.031000 | 0.004000 |
1.240000 |
hsa-miR-4291 |
tagttTGCTGAAaatttac |
0 | UUCAGCAG | m7a | Created | no TS | -0.057000 |
-0.620000 |
hsa-miR-4766-3p |
tagtTTGCTAaaaatttac |
9 |
AUAGCAAU | m6b | Disrupted | 0.127000 | 0.159000 | No effect |
hsa-miR-545-3p |
tagTTTGCTGAaaatttac |
7 |
UCAGCAAA | m8a | Created | -0.094000 | -0.206000 |
-0.280000 |
hsa-miR-548p |
tagTTTGCTAaaaatttac |
8 |
UAGCAAAA | m7a | (m7a->m6a) | 0.032000 | 0.033000 |
0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068138T>G | COSN9726612 | C0009T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-105-5p |
tatGCATTTGgtgaggtac |
7 |
UCAAAUGC | m7b | (m6b->m7b) | 0.000000 | -0.005000 |
-0.330000 |
hsa-miR-4698 |
tatgCATTTTGtgaggtac |
4 |
UCAAAAUG | m7b | Disrupted | 0.548000 | 0.445000 |
0.240000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068262C>T | COSN6782216 | RK185_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3120-3p |
taagaaaTGCTGTattctt |
16 |
CACAGCAA | m6b | Disrupted | 0.034000 | 0.045000 |
3.040000 |
hsa-miR-3529-3p |
taagaaaTGTTGTattctt |
2 |
AACAACAA | m6b | Created | -0.010000 | 0.028000 |
-0.010000 |
hsa-miR-4310 |
taagaAATGCTGtattctt |
2 |
GCAGCAUU | m7b | Disrupted | -0.176000 | -0.149000 |
0.030000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068448G>T | COSN1282857 | HX17T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068468C>T | cosmic_v64_1751958 | ccRCC | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4711-5p |
gatgtCTGATGCAtgatgg |
0 | UGCAUCAG | m8a | Created | no TS | -0.08 |
-0.23 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068498A>T | COSN5544315 | RK125_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1323 |
aaaaatAGTTTTGtggaat |
15 |
UCAAAACU | m7b | Created | 0.079000 | 0.142000 |
-1.910000 |
hsa-miR-548o-3p |
aaaaatAGTTTTGtggaat |
15 |
CCAAAACU | m7b | Created | 0.076000 | 0.102000 |
-0.670000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068578G>C | COSN6427490 | HX36T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-2278 |
aagggTGCTCTatctttga |
0 | GAGAGCAG | m6b | Created | no TS | -0.002000 | No effect |
hsa-miR-3065-3p |
aagGGTGCTGtatctttga |
16 |
UCAGCACC | m7b | (m7b->m6b) | -0.095000 | no TS |
4.220000 |
hsa-miR-3120-3p |
aagggTGCTGTatctttga |
16 |
CACAGCAA | m6b | Disrupted | 0.034000 | 0.017000 | No effect |
hsa-miR-3663-3p |
aagGGTGCTCtatctttga |
0 | UGAGCACC | m7b | (m6b->m7b) | no TS | -0.083000 |
-2.350000 |
hsa-miR-4662a-3p |
aagggtgctCTATCTTTga |
3 |
AAAGAUAG | m8a | (m7b->m8a) | 0.028000 | 0.048000 |
-0.070000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068635T>G | COSN1969044 | RK029_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-10a-3p |
ttaGAATTTGaaagttttt |
0 | CAAAUUCG | m7a | (m6a->m7a) | NA | NA | No effect |
hsa-miR-3671 |
ttagaATTTGAaagttttt |
14 |
AUCAAAUA | m6b | Created | 0.195000 | 0.313000 |
-0.020000 |
hsa-miR-4282 |
ttagAATTTTAaagttttt |
18 |
UAAAAUUU | m7a | Disrupted | 2.383000 | 2.200000 |
0.030000 |
hsa-miR-607 |
ttagaATTTGAAagttttt |
14 |
GUUCAAAU | m7b | Created | 0.333000 | 0.537000 | No effect |
hsa-miR-10a-3p |
ttaGAATTTGaaagttttt |
0 | CAAAUUCG | m7a | (m6a->m7a) | NA | NA | No effect |
hsa-miR-3671 |
ttagaATTTGAaagttttt |
14 |
AUCAAAUA | m6b | Created | 0.195000 | 0.313000 |
-0.020000 |
hsa-miR-4282 |
ttagAATTTTAaagttttt |
18 |
UAAAAUUU | m7a | Disrupted | 2.383000 | 2.200000 |
0.030000 |
hsa-miR-607 |
ttagaATTTGAAagttttt |
14 |
GUUCAAAU | m7b | Created | 0.333000 | 0.537000 | No effect |
hsa-miR-10a-3p |
ttaGAATTTGaaagttttt |
0 | CAAAUUCG | m7a | (m6a->m7a) | NA | NA | No effect |
hsa-miR-3671 |
ttagaATTTGAaagttttt |
0 | AUCAAAUA | m6b | Created | 0.195 | 0.313 |
3.23 |
hsa-miR-4282 |
ttagAATTTTAaagttttt |
5 |
UAAAAUUU | m7a | Disrupted | 2.383 | 2.2 |
0.03 |
hsa-miR-607 |
ttagaATTTGAAagttttt |
0 | GUUCAAAU | m7b | Created | 0.333 | 0.537 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86068927C>A | COSN8489657 | 4000_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4711-3p |
tactAGACACattgaaact |
17 |
CGUGUCUU | m6b | Disrupted | 0.022000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86069033T>C | COSN9726613 | C0007T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4511 |
tggaaagGTTCTTattaca |
2 |
GAAGAACU | m6b | Disrupted | 0.022000 | -0.016000 |
0.050000 |
hsa-miR-548b-3p |
tggaaaGGTTCTTattaca |
11 |
CAAGAACC | m7b | Disrupted | -0.050000 | no TS |
2.370000 |
hsa-miR-659-5p |
tggaAAGGTCCTtattaca |
0 | AGGACCUU | m8a | Created | no TS | -0.091000 |
-0.420000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86069334A>G | COSN6782217 | RK171_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86069348C>G | COSN4822091 | tumor_4108101 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3923 |
attattaTACTAGTTataa |
0 | AACUAGUA | m8a | Disrupted | -0.084000 | -0.001000 | No effect |
hsa-miR-606 |
attattatAGTAGTTataa |
0 | AAACUACU | m7b | Created | no TS | -0.065000 |
-0.180000 |
hsa-miR-625-3p |
attatTATAGTagttataa |
6 |
GACUAUAG | m6b | Created | -0.127000 | -0.077000 | No effect |
hsa-miR-708-3p |
attattataCTAGTTataa |
2 |
CAACUAGA | m6b | Disrupted | -0.068000 | -0.079000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86069380G>T | COSN6782218 | RK070_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-188-3p |
ataattTGTGGGAtctaat |
0 | CUCCCACA | m7b | Disrupted | -0.108000 | no TS |
0.840000 |
hsa-miR-3065-5p |
ataaTTTGTTGgatctaat |
2 |
UCAACAAA | m7b | Created | 0.160000 | 0.193000 | No effect |
hsa-miR-4719 |
ataATTTGTGggatctaat |
10 |
UCACAAAU | m7b | (m7b->m6b) | 0.087000 | 0.113000 |
0.220000 |
hsa-miR-7-1-3p |
ataATTTGTTGgatctaat |
2 |
CAACAAAU | m8a | Created | 0.434000 | 0.541000 | No effect |
hsa-miR-7-2-3p |
ataATTTGTTGgatctaat |
2 |
CAACAAAU | m8a | Created | 0.413000 | 0.501000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86069973G>A | COSN6782219 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-329 |
tgtgtGTGTGTatatgtgt |
0 | AACACACC | m6b | Disrupted | 0.049000 | 0.042000 |
-0.610000 |
hsa-miR-362-3p |
tgtgtGTGTGTatatgtgt |
0 | AACACACC | m6b | Disrupted | 0.049000 | 0.048000 |
-0.720000 |
hsa-miR-3941 |
tgtgtGTGTGTAtatgtgt |
0 | UUACACAC | m7b | Disrupted | 0.042000 | 0.021000 |
-0.630000 |
hsa-miR-466 |
tgtgtgTGTGTATatgtgt |
18 |
AUACACAU | m7a | Disrupted | 0.003000 | 0.003000 |
0.710000 |
hsa-miR-4789-5p |
tgtgtgtGTGTATAtgtgt |
0 | GUAUACAC | m7b | Disrupted | 0.159000 | 0.126000 |
-1.600000 |
hsa-miR-5011-5p |
tgtgtgtgTATATATgtgt |
0 | UAUAUAUA | m7b | Created | 1.615000 | 1.841000 |
-0.070000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86070447G>C | COSN9576442 | AOCS-158-1-6 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-19a-3p |
ttttcTTTGCACAtcaagg |
13 |
UGUGCAAA | m8a | Created | 0.046000 | 0.050000 |
-0.020000 |
hsa-miR-19b-3p |
ttttcTTTGCACAtcaagg |
13 |
UGUGCAAA | m8a | Created | 0.046000 | 0.050000 |
-0.010000 |
hsa-miR-2964a-5p |
ttttctttGGACATCaagg |
0 | AGAUGUCC | m7b | Disrupted | -0.160000 | no TS |
0.040000 |
hsa-miR-518a-5p |
ttttCTTTGCAcatcaagg |
0 | CUGCAAAG | m7b | Created | 0.217000 | 0.236000 |
-0.010000 |
hsa-miR-527 |
ttttCTTTGCAcatcaagg |
0 | CUGCAAAG | m7b | Created | 0.217000 | 0.236000 |
-0.010000 |
hsa-miR-548aw |
ttttcTTTGCACatcaagg |
10 |
GUGCAAAA | m7a | Created | 0.127000 | 0.127000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86070449C>T | 9_68439 | CRC-7-Tumor | Colorectal adenocarcinoma | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-144-5p |
ttctttgGATATCaaggta |
6 |
GGAUAUCA | m6b | Created | no TS | 0.02 | No effect |
hsa-miR-2964a-5p |
ttctttGGACATCaaggta |
6 |
AGAUGUCC | m7b | Disrupted | -0.16 | no TS |
0.02 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86070529T>G | COSN7714565 | 8044091 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3617 |
aacctcATGTCTTaccaca |
0 | AAAGACAU | m7b | Disrupted | 0.149000 | no TS |
3.370000 |
hsa-miR-641 |
aacctcATGTCTTaccaca |
0 | AAAGACAU | m7b | Disrupted | 0.180000 | no TS |
1.600000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86070707T>A | COSN4822092 | tumor_4177434 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4477a |
tgctttTTAATAagtggca |
2 |
CUAUUAAG | m6b | Created | 0.144000 | 0.326000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86070774A>C | COSN14969610 | LP6005409-DNA_G03 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-600 |
gtacaTGTAAGTatcttgt |
0 | ACUUACAG | m7a | Disrupted | NA | NA | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071022C>A | COSN5150297 | PD4006a | [breast][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4452 |
atactaaaGAATTCAttaa |
4 |
UUGAAUUC | m7b | Created | 0.118000 | 0.106000 |
-0.150000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071597A>T | COSN5048599 | HX26T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-138-2-3p |
cttcaatatAAATAGagga |
2 |
GCUAUUUC | m6b | Disrupted | 0.470000 | 0.338000 | No effect |
hsa-miR-4477a |
cttcaataTTAATAGagga |
2 |
CUAUUAAG | m7a | Created | 0.144000 | 0.144000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071599A>G | COSN14640638 | PCSI_0072_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-138-1-3p |
tcaatatAAGTAGaggaaa |
14 |
GCUACUUC | m6b | Created | -0.026000 | 0.030000 | No effect |
hsa-miR-138-2-3p |
tcaatatAAATAGaggaaa |
2 |
GCUAUUUC | m6b | Disrupted | 0.470000 | 0.338000 | No effect |
hsa-miR-138-1-3p |
tcaatatAAGTAGaggaaa |
14 |
GCUACUUC | m6b | Created | -0.026000 | 0.030000 | No effect |
hsa-miR-138-2-3p |
tcaatatAAATAGaggaaa |
2 |
GCUAUUUC | m6b | Disrupted | 0.470000 | 0.338000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071659A>T | COSN9726614 | C0058T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1208 |
tattatAACAGTGcactcc |
6 |
UCACUGUU | m7b | Disrupted | 0.063000 | 0.026000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071878G>A | COSN5807167 | EOPC-04_tumor | [prostate][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-5004-3p |
acactttgcAATCCAAtct |
0 | CUUGGAUU | m7b | (m6c->m7b) | -0.046000 | 0.008000 | No effect |
hsa-miR-518a-5p |
acaCTTTGCAatccaatct |
0 | CUGCAAAG | m7b | (m6b->m7b) | 0.217000 | 0.231000 |
-0.010000 |
hsa-miR-527 |
acaCTTTGCAatccaatct |
0 | CUGCAAAG | m7b | (m6b->m7b) | 0.217000 | 0.231000 |
-0.010000 |
hsa-miR-548aw |
acacTTTGCAatccaatct |
10 |
GUGCAAAA | m6b | Created | 0.127000 | 0.197000 |
-0.070000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071915T>G | COSN8929533 | SS6003121 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-208a |
tgtaacaatGTCTTATaaa |
0 | AUAAGACG | m7a | (m6b->m7a) | NA | NA |
-0.050000 |
hsa-miR-208b |
tgtaacaatGTCTTATaaa |
0 | AUAAGACG | m7a | (m6b->m7a) | NA | NA |
-0.050000 |
hsa-miR-3617 |
tgtaacaATGTCTTataaa |
0 | AAAGACAU | m7b | Created | 0.149000 | 0.178000 |
-3.700000 |
hsa-miR-641 |
tgtaacaATGTCTTataaa |
0 | AAAGACAU | m7b | Created | 0.180000 | 0.209000 |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071927C>T | COSN1969045 | RK021_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071968T>C | COSN8368874 | tumor_4166706 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86071971C>T | COSN9576443 | AOCS-161-1-9 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-374c-3p |
ttattttaCTAAGTagtat |
0 | CACUUAGC | m6b | Created | no TS | 0.011000 |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072016C>A | COSN7714566 | 8066081 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3159 |
tttaaaaaTAATCCTtatt |
2 |
UAGGAUUA | m7b | Created | -0.001000 | -0.069000 |
-0.130000 |
hsa-miR-541-5p |
tttaaaaatAATCCTTatt |
0 | AAAGGAUU | m7b | (m6c->m7b) | 0.015000 | 0.001000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072268T>C | COSN5005716 | SS6003125 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1185-5p |
tggttgATCCTCacatatt |
0 | AGAGGAUA | m6b | Created | -0.050000 | -0.082000 |
-0.310000 |
hsa-miR-1224-5p |
tggttgaTCCTCACatatt |
0 | GUGAGGAC | m7a | Created | NA | NA | No effect |
hsa-miR-3611 |
tggttgatCTTCACAtatt |
0 | UUGUGAAG | m7b | Disrupted | -0.301000 | -0.207000 | No effect |
hsa-miR-4316 |
tggttgatCCTCACatatt |
0 | GGUGAGGC | m6b | Created | no TS | -0.043000 | No effect |
hsa-miR-4699-5p |
tggttgATCTTCacatatt |
4 |
AGAAGAUU | m6b | Disrupted | 0.187000 | 0.151000 |
0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072292A>G | COSN5544317 | RK145_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-5011-5p |
tgcaTATATATAtcaagaa |
0 | UAUAUAUA | m8a | Disrupted | 1.615000 | 1.164000 | No effect |
hsa-miR-5580-3p |
tgcatATATGTatcaagaa |
2 |
CACAUAUG | m6b | Created | -0.102000 | -0.001000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072819T>C | COSN4822093 | tumor_4177856 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1253 |
ctttttgcTCTTCTCTgtg |
0 | AGAGAAGA | m8a | Created | no TS | 0.045000 |
-0.020000 |
hsa-miR-5197-3p |
ctttttgCTCTTCTctgtg |
3 |
AAGAAGAG | m7b | Created | 0.109000 | 0.152000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072824C>G | COSN1969046 | RK001_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3919 |
tgcttTTCTCTGtgttttt |
10 |
GCAGAGAA | m7b | Disrupted | 0.094000 | 0.121000 |
0.490000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072839A>G | COSN1969047 | RK001_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3692-3p |
ttttaatgTGTGGAAtaaa |
14 |
GUUCCACA | m7b | Created | -0.047000 | -0.076000 |
-5.320000 |
hsa-miR-587 |
ttttaatgTATGGAAtaaa |
0 | UUUCCAUA | m7b | Disrupted | -0.012000 | -0.042000 |
0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072853A>T | COSN9576444 | AOCS-094-6-X | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4712-3p |
ataaaTCTCATaaatagaa |
9 |
AAUGAGAG | m6b | Disrupted | -0.082000 | -0.077000 |
-0.050000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86072936A>G | COSN5544318 | RK156_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-450b-5p |
aatctttTTGCAAAtttat |
11 |
UUUUGCAA | m7b | Created | 0.292000 | 0.273000 |
-0.070000 |
hsa-miR-518a-5p |
aatcttTTTGCAaatttat |
0 | CUGCAAAG | m6b | Created | 0.217000 | 0.259000 |
-0.020000 |
hsa-miR-527 |
aatcttTTTGCAaatttat |
0 | CUGCAAAG | m6b | Created | 0.217000 | 0.259000 |
-0.020000 |
hsa-miR-548aj-5p |
aatctTTTTGCAaatttat |
2 |
UGCAAAAG | m7a | Created | 0.077000 | 0.144000 |
-0.310000 |
hsa-miR-548aw |
aatctTTTTGCAaatttat |
10 |
GUGCAAAA | m7b | Created | 0.127000 | 0.197000 |
-1.860000 |
hsa-miR-548g-5p |
aatctTTTTGCAaatttat |
2 |
UGCAAAAG | m7a | Created | 0.077000 | 0.144000 |
-0.310000 |
hsa-miR-548x-5p |
aatctTTTTGCAaatttat |
2 |
UGCAAAAG | m7a | Created | 0.077000 | 0.144000 |
-0.310000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86073051C>T | COSN8929534 | SS6003149 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1257 |
tattgCATTCACatcaata |
2 |
AGUGAAUG | m7b | Disrupted | -0.202000 | -0.222000 |
0.010000 |
hsa-miR-3171 |
tattgcattTACATCaata |
0 | AGAUGUAU | m6b | Created | no TS | -0.009000 | No effect |
hsa-miR-4495 |
tattgcaTTTACATcaata |
3 |
AAUGUAAA | m7b | Created | 0.048000 | 0.130000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86073803T>A | COSN7714567 | 8033610 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-224-3p |
ttgaatACCATTTTttcaa |
3 |
AAAAUGGU | m8a | Created | 0.073000 | -0.040000 |
-0.010000 |
hsa-miR-4678 |
ttgAATACCTTtttttcaa |
3 |
AAGGUAUU | m8a | Disrupted | -0.402000 | -0.286000 |
0.010000 |
hsa-miR-522-3p |
ttgaatACCATTTTttcaa |
3 |
AAAAUGGU | m8a | Created | 0.056000 | -0.075000 |
-0.040000 |
hsa-miR-548m |
ttgaaTACCTTTttttcaa |
4 |
CAAAGGUA | m7b | Disrupted | -0.037000 | 0.087000 |
0.610000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86073905T>A | COSN15019271 | LP6007414-DNA_A02 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4762-3p |
aagcATCAGAAaaataaat |
0 | CUUCUGAU | m7b | Created | 0.005000 | -0.195000 |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86074051A>T | COSN5544319 | RK101_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-let-7f-2-3p |
aactCTGTATAGgtaattt |
6 |
CUAUACAG | m8a | Created | -0.031000 | -0.142000 |
-0.010000 |
hsa-miR-1185-1-3p |
aactCTGTATAggtaattt |
6 |
AUAUACAG | m7b | Created | 0.012000 | -0.090000 |
-0.280000 |
hsa-miR-1185-2-3p |
aactCTGTATAggtaattt |
6 |
AUAUACAG | m7b | Created | 0.033000 | -0.069000 |
-0.990000 |
hsa-miR-1284 |
aactcTGTATAGgtaattt |
2 |
UCUAUACA | m7b | Created | 0.057000 | -0.077000 |
-1.620000 |
hsa-miR-4724-3p |
aactctgtaAAGGTAattt |
2 |
GUACCUUC | m6b | Disrupted | -0.099000 | 0.012000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86074137T>A | COSN7714568 | 8057501 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3611 |
ttttaacCTTCACActcta |
0 | UUGUGAAG | m7b | Disrupted | -0.301000 | -0.131000 |
0.030000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86074345T>A | COSN9576445 | AOCS-117-3-3 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-let-7a-2-3p |
gccaaaggCTGTACAagat |
9 |
CUGUACAG | m7b | Disrupted | -0.288000 | -0.004000 |
0.170000 |
hsa-let-7g-3p |
gccaaaggCTGTACAagat |
9 |
CUGUACAG | m7b | Disrupted | -0.270000 | 0.003000 |
0.310000 |