SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_197967
Gene Symbol: BID
Description: Homo sapiens BH3 interacting domain death agonist (BID), transcript variant 2, mRNA.
Gene Location: chr22(-):18216905-18257258
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr22:g.17734332C>T BID_E6_UTR_3 SJHYPO004_D Hypodiploid_ALL
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-325 tcttctTACTAGatgcttt
0 CCUAGUAG m6b Created no TS -0.107 -3.94
hsa-miR-4490 tcttcTTACCAGAtgcttt
0 UCUGGUAA m8a Disrupted -0.297 no TS 2.86
hsa-miR-628-3p tcttcTTACTAGAtgcttt
0 UCUAGUAA m8a Created no TS -0.256 -3.94

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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