SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001204109
Gene Symbol: BCL2L11
Description: Homo sapiens BCL2-like 11 (apoptosis facilitator) (BCL2L11), transcript variant 11, mRNA.
Gene Location: chr2(+):111878490-111926022
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.111164160G>A ICGC_1302764 TCGA-A5-A0GU-01A-11W-A062-09 UterineCorpusEndometrioidCarcinoma(TCGA,US)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-647 caaGCAGCCAaagaccacc
 0 GUGGCUGC m7b (m6b->m7b) -0.168 -0.648 -1.76

Mutation Mutation ID Sample Name Cancer Type
chr2:g.111164172C>T ICGC_1302765 TCGA-BS-A0UV-01A-11D-A10B-09 UterineCorpusEndometrioidCarcinoma(TCGA,US)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3677-3p gaccaCCCACGAatggtta
 0 CUCGUGGG m7b Disrupted -0.555 no TS 0.01

Mutation Mutation ID Sample Name Cancer Type
chr2:g.111164194->A ICGC_1302766 TCGA-AJ-A23M-01A-11D-A159-09 UterineCorpusEndometrioidCarcinoma(TCGA,US)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-132-3p tacGACTGTTAcgttacat
 0 UAACAGUC m8a Disrupted -0.264000 -0.284000 0.580000
hsa-miR-194-5p tacgaCTGTTACgttacat
 0 UGUAACAG m7b Disrupted -0.135000 no TS 0.950000
hsa-miR-212-3p tacGACTGTTAcgttacat
 0 UAACAGUC m8a Disrupted -0.243000 -0.263000 0.410000

Mutation Mutation ID Sample Name Cancer Type
chr2:g.111166831A>T ICGC_sm102534 RK023_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-183-3p tagtggAATTCAattgtct
 0 GUGAAUUA m6b Created no TS 0.124 No effect
hsa-miR-4452 tagtgGAATTCAAttgtct
 0 UUGAAUUC m8a Created no TS 0.127 No effect
hsa-miR-630 tagtgGAATACaattgtct
 0 AGUAUUCU m6b Disrupted 0.047 no TS 0.07

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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