SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_022893 |
---|---|
Gene Symbol: | BCL11A |
Description: | Homo sapiens B-cell CLL/lymphoma 11A (zinc finger protein) (BCL11A), transcript variant 2, mRNA. |
Gene Location: | chr2(-):60684328-60780633 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60457345T>C | COSN6189174 | RK308_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-2054 |
aaaggtcATTACAacctgg |
15 |
CUGUAAUA | m6b | Disrupted | -0.036000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60457351G>A | COSN5508057 | RK090_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-9-5p |
atgACCAAAGgtcattaca |
19 |
UCUUUGGU | m7b | (m7b->m6c) | -0.189000 | no TS |
1.710000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60457354A>G | COSN6189175 | RK219_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-5587-5p |
tagaTGACCAaaggtcatt |
20 |
AUGGUCAC | m6b | Disrupted | -0.160000 | no TS |
0.040000 |
|
hsa-miR-9-5p |
tagatgACCAAAGgtcatt |
19 |
UCUUUGGU | m7b | Disrupted | -0.189000 | no TS |
0.050000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60457360A>G | COSN5030981 | HX24T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4799-5p |
tttATTTAGATgaccaaag |
3 |
AUCUAAAU | m8a | Disrupted | -0.207000 | -0.106000 |
0.250000 |
|
hsa-miR-5009-3p |
tttATTTAGGtgaccaaag |
0 | UCCUAAAU | m7b | (m6c->m7b) | no TS | -0.191000 |
-4.150000 |
|
hsa-miR-5587-5p |
tttatttagGTGACCAaag |
20 |
AUGGUCAC | m7b | (m6b->m7b) | -0.160000 | -0.407000 |
-4.730000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60457954A>G | COSN7078844 | 8032817 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-130b-5p |
aaaaaaaaAAAGAGagaaa |
10 |
ACUCUUUC | m6b | Disrupted | -0.044000 | -0.043000 |
-2.980000 |
|
hsa-miR-4753-3p |
aaaaaaaaAAAGAGAgaaa |
10 |
UUCUCUUU | m7b | Disrupted | -0.264000 | -0.248000 |
-0.210000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60458451A>G | COSN1849527 | RK086_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4799-5p |
actttTTTAGATataaatg |
3 |
AUCUAAAU | m7a | Created | -0.207000 | -0.207000 | No effect | |
hsa-miR-4799-5p |
actttTTTAGATataaatg |
0 | AUCUAAAU | m7a | Created | -0.207 | -0.207 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60459296T>A | COSN14558775 | 8066081 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4422 |
gatattTGCTTTaataatg |
21 |
AAAAGCAU | m6b | Disrupted | -0.061000 | -0.065000 |
0.020000 |
|
hsa-miR-5700 |
gatattTGCATTAataatg |
19 |
UAAUGCAU | m7a | Created | -0.076000 | -0.094000 | No effect | |
hsa-miR-9-3p |
gatatttGCTTTAataatg |
1 |
AUAAAGCU | m6b | Disrupted | -0.009000 | no TS | No effect | |
hsa-miR-4422 |
gatattTGCTTTaataatg |
21 |
AAAAGCAU | m6b | Disrupted | -0.061000 | -0.065000 |
0.020000 |
|
hsa-miR-5700 |
gatattTGCATTAataatg |
19 |
UAAUGCAU | m7a | Created | -0.076000 | -0.094000 | No effect | |
hsa-miR-9-3p |
gatatttGCTTTAataatg |
1 |
AUAAAGCU | m6b | Disrupted | -0.009000 | no TS | No effect | |
hsa-miR-4422 |
gatattTGCTTTaataatg |
21 |
AAAAGCAU | m6b | Disrupted | -0.061000 | -0.065000 |
0.020000 |
|
hsa-miR-5700 |
gatattTGCATTAataatg |
19 |
UAAUGCAU | m7a | Created | -0.076000 | -0.094000 | No effect | |
hsa-miR-9-3p |
gatatttGCTTTAataatg |
1 |
AUAAAGCU | m6b | Disrupted | -0.009000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60459297C>A | COSN14558255 | 8066081 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3671 |
agaTATTTGATttaataat |
21 |
AUCAAAUA | m8a | Created | 0.033000 | 0.031000 | No effect | |
hsa-miR-4422 |
agatattTGCTTTaataat |
21 |
AAAAGCAU | m6b | Disrupted | -0.061000 | -0.065000 |
0.020000 |
|
hsa-miR-551b-5p |
agatatTTGATTTaataat |
12 |
GAAAUCAA | m7b | Created | 0.072000 | 0.150000 | No effect | |
hsa-miR-9-3p |
agatatttGCTTTAataat |
1 |
AUAAAGCU | m6b | Disrupted | -0.009000 | no TS | No effect | |
hsa-miR-3671 |
agaTATTTGATttaataat |
21 |
AUCAAAUA | m8a | Created | 0.033000 | 0.031000 | No effect | |
hsa-miR-4422 |
agatattTGCTTTaataat |
21 |
AAAAGCAU | m6b | Disrupted | -0.061000 | -0.065000 |
0.020000 |
|
hsa-miR-551b-5p |
agatatTTGATTTaataat |
12 |
GAAAUCAA | m7b | Created | 0.072000 | 0.150000 | No effect | |
hsa-miR-9-3p |
agatatttGCTTTAataat |
1 |
AUAAAGCU | m6b | Disrupted | -0.009000 | no TS | No effect | |
hsa-miR-3671 |
agaTATTTGATttaataat |
21 |
AUCAAAUA | m8a | Created | 0.033000 | 0.031000 | No effect | |
hsa-miR-4422 |
agatattTGCTTTaataat |
21 |
AAAAGCAU | m6b | Disrupted | -0.061000 | -0.065000 |
0.020000 |
|
hsa-miR-551b-5p |
agatatTTGATTTaataat |
12 |
GAAAUCAA | m7b | Created | 0.072000 | 0.150000 | No effect | |
hsa-miR-9-3p |
agatatttGCTTTAataat |
1 |
AUAAAGCU | m6b | Disrupted | -0.009000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60459980T>C | COSN5508058 | RK140_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-103a-3p |
gcaaacATGCTGCTgtttc |
18 |
AGCAGCAU | m8a | Created | -0.256000 | -0.410000 |
0.080000 |
|
hsa-miR-107 |
gcaaacATGCTGCTgtttc |
18 |
AGCAGCAU | m8a | Created | -0.256000 | -0.410000 |
0.090000 |
|
hsa-miR-15a-5p |
gcaaacaTGCTGCTgtttc |
0 | UAGCAGCA | m7b | Created | no TS | -0.173000 |
0.020000 |
|
hsa-miR-15b-5p |
gcaaacaTGCTGCTgtttc |
0 | UAGCAGCA | m7b | Created | no TS | -0.173000 |
0.090000 |
|
hsa-miR-16-5p |
gcaaacaTGCTGCTgtttc |
0 | UAGCAGCA | m7b | Created | no TS | -0.155000 |
-0.060000 |
|
hsa-miR-195-5p |
gcaaacaTGCTGCTgtttc |
0 | UAGCAGCA | m7b | Created | no TS | -0.155000 | No effect | |
hsa-miR-3120-3p |
gcaaacatgTTGCTGTttc |
16 |
CACAGCAA | m7b | (m7b->m6b) | -0.084000 | no TS |
0.210000 |
|
hsa-miR-424-5p |
gcaaacaTGCTGCTGtttc |
0 | CAGCAGCA | m8a | Created | no TS | -0.183000 |
-0.230000 |
|
hsa-miR-497-5p |
gcaaacaTGCTGCTGtttc |
0 | CAGCAGCA | m8a | Created | no TS | -0.173000 |
0.160000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60460311A>G | COSN1240866 | BN26T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-155-3p |
cccTGTAGGAtttttttct |
0 | CUCCUACA | m7b | (m7b->m6c) | -0.164000 | no TS |
2.200000 |
|
hsa-miR-4668-3p |
ccctgtaGGATTTTtttct |
0 | GAAAAUCC | m7b | Disrupted | -0.094000 | -0.001000 |
0.520000 |
|
hsa-miR-548ac |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.114000 | 0.103000 | No effect | |
hsa-miR-548as-3p |
ccctgtaGGGTTTTtttct |
12 |
UAAAACCC | m7b | Created | -0.022000 | -0.169000 |
-1.792000 |
|
hsa-miR-548c-3p |
ccctgtagGATTTTTttct |
22 |
CAAAAAUC | m7b | Disrupted | 0.563000 | 0.521000 |
0.010000 |
|
hsa-miR-548d-3p |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.117000 | 0.088000 |
-0.010000 |
|
hsa-miR-548h-3p |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.120000 | 0.091000 | No effect | |
hsa-miR-548z |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.120000 | 0.091000 | No effect | |
hsa-miR-652-5p |
ccctgTAGGGTTtttttct |
15 |
CAACCCUA | m7b | Created | -0.204000 | -0.409000 |
-1.910000 |
|
hsa-miR-155-3p |
cccTGTAGGAtttttttct |
0 | CUCCUACA | m7b | (m7b->m6c) | -0.164000 | no TS |
2.200000 |
|
hsa-miR-4668-3p |
ccctgtaGGATTTTtttct |
0 | GAAAAUCC | m7b | Disrupted | -0.094000 | -0.001000 |
0.520000 |
|
hsa-miR-548ac |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.114000 | 0.103000 | No effect | |
hsa-miR-548as-3p |
ccctgtaGGGTTTTtttct |
12 |
UAAAACCC | m7b | Created | -0.022000 | -0.169000 |
-1.792000 |
|
hsa-miR-548c-3p |
ccctgtagGATTTTTttct |
22 |
CAAAAAUC | m7b | Disrupted | 0.563000 | 0.521000 |
0.010000 |
|
hsa-miR-548d-3p |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.117000 | 0.088000 |
-0.010000 |
|
hsa-miR-548h-3p |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.120000 | 0.091000 | No effect | |
hsa-miR-548z |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.120000 | 0.091000 | No effect | |
hsa-miR-652-5p |
ccctgTAGGGTTtttttct |
15 |
CAACCCUA | m7b | Created | -0.204000 | -0.409000 |
-1.910000 |
|
hsa-miR-155-3p |
cccTGTAGGAtttttttct |
0 | CUCCUACA | m7b | (m7b->m6c) | -0.164 | no TS |
2.2 |
|
hsa-miR-4668-3p |
ccctgtaGGATTTTtttct |
0 | GAAAAUCC | m7b | Disrupted | -0.094 | -0.001 |
0.52 |
|
hsa-miR-548ac |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.114 | 0.103 | No effect | |
hsa-miR-548as-3p |
ccctgtaGGGTTTTtttct |
0 | UAAAACCC | m7b | Created | -0.022 | -0.169 |
-1.792 |
|
hsa-miR-548c-3p |
ccctgtagGATTTTTttct |
0 | CAAAAAUC | m7b | Disrupted | 0.563 | 0.521 |
0.01 |
|
hsa-miR-548d-3p |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.117 | 0.088 |
-0.01 |
|
hsa-miR-548h-3p |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.12 | 0.091 | No effect | |
hsa-miR-548z |
ccctgtagGGTTTTTttct |
0 | CAAAAACC | m7b | Created | 0.12 | 0.091 | No effect | |
hsa-miR-652-5p |
ccctgTAGGGTTtttttct |
0 | CAACCCUA | m7b | Created | -0.204 | -0.409 |
-1.91 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60460331C>A | COSN8315398 | TCGA-AC-A2FB-01 | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-135b-3p |
catcgCCCTACAgccccac |
15 |
AUGUAGGG | m7b | Created | -0.226000 | -0.352000 |
-0.930000 |
|
hsa-miR-3135b |
catcgccCTCCAGCCccac |
20 |
GGCUGGAG | m8a | Disrupted | -0.216000 | -0.115000 |
10.530000 |
|
hsa-miR-3652 |
catcgcccTCCAGCCccac |
19 |
CGGCUGGA | m7b | Disrupted | -0.198000 | -0.085000 |
9.890000 |
|
hsa-miR-4430 |
catcgcccTCCAGCCccac |
19 |
AGGCUGGA | m7b | Disrupted | -0.217000 | -0.085000 |
9.550000 |
|
hsa-miR-4492 |
catcgccctCCAGCCCCac |
15 |
GGGGCUGG | m8a | (m8a->m7a) | -0.230000 | no TS |
5.680000 |
|
hsa-miR-4498 |
catcgccctCCAGCCCcac |
15 |
UGGGCUGG | m7b | (m7b->m6b) | -0.239000 | no TS |
4.440000 |
|
hsa-miR-4675 |
catcgccctACAGCCCCac |
0 | GGGGCUGU | m8a | (m7a->m8a) | no TS | -0.196000 |
1.140000 |
|
hsa-miR-4741 |
catcgccctACAGCCCcac |
0 | CGGGCUGU | m7b | (m6b->m7b) | no TS | -0.215000 |
0.100000 |
|
hsa-miR-5001-5p |
catcgccctCCAGCCCcac |
15 |
AGGGCUGG | m7b | (m7b->m6b) | -0.230000 | no TS |
6.980000 |
|
hsa-miR-762 |
catcgccctCCAGCCCCac |
15 |
GGGGCUGG | m8a | (m8a->m7a) | -0.230000 | no TS |
2.600000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60460343C>G | COSN5030983 | HX21T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-2110 |
actccccTTCCCCAtcgcc |
0 | UUGGGGAA | m7b | Disrupted | -0.073000 | no TS |
4.460000 |
|
hsa-miR-3179 |
actCCCCTTCcccatcgcc |
7 |
AGAAGGGG | m7b | (m7b->m6c) | -0.152000 | no TS |
2.140000 |
|
hsa-miR-3202 |
actcCCCTTCCccatcgcc |
7 |
UGGAAGGG | m7b | Disrupted | -0.118000 | no TS |
1.330000 |
|
hsa-miR-4271 |
actcccCTTCCCCatcgcc |
0 | GGGGGAAG | m7b | Disrupted | -0.332000 | no TS |
6.740000 |
|
hsa-miR-4725-3p |
actcccCTTCCCCAtcgcc |
0 | UGGGGAAG | m8a | Disrupted | -0.322000 | no TS |
5.100000 |
|
hsa-miR-4747-5p |
actccCCTTCCCcatcgcc |
7 |
AGGGAAGG | m7b | Disrupted | -0.142000 | no TS |
11.270000 |
|
hsa-miR-5196-5p |
actccCCTTCCCcatcgcc |
7 |
AGGGAAGG | m7b | Disrupted | -0.124000 | no TS |
4.850000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60460350T>A | COSN5508059 | RK156_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3936 |
tttcaccacACCCCTTccc |
0 | UAAGGGGU | m7b | (m6b->m7b) | no TS | -0.135000 |
-0.030000 |
|
hsa-miR-4455 |
tttcacCACACCCcttccc |
17 |
AGGGUGUG | m7b | Created | -0.209000 | -0.380000 |
-3.620000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr2:g.60460374A>C | COSN8315399 | TCGA-A2-A0T5-01 | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-125a-3p |
ctcactccCACCTGacacc |
12 |
ACAGGUGA | m6b | Disrupted | -0.112000 | no TS |
2.560000 |
|
hsa-miR-4723-5p |
ctcaCTCCCCCctgacacc |
0 | UGGGGGAG | m7b | Created | no TS | -0.270000 |
-0.400000 |
|
hsa-miR-5698 |
ctcaCTCCCCCctgacacc |
0 | UGGGGGAG | m7b | Created | no TS | -0.251000 |
0.010000 |
|
hsa-miR-764 |
ctcactccCACCTGacacc |
12 |
GCAGGUGC | m6b | Disrupted | -0.104000 | no TS |
0.170000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.60460385C>A | COSN5030984 | HX31T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-let-7a-5p |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.341000 |
-8.940000 |
hsa-let-7b-5p |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.330000 |
-7.850000 |
hsa-let-7c |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.330000 |
-8.640000 |
hsa-let-7d-5p |
aatacccCTACCTCactcc |
0 | AGAGGUAG | m7b | Created | no TS | -0.330000 |
-5.430000 |
hsa-let-7e-5p |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.341000 |
-4.070000 |
hsa-let-7f-5p |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.341000 |
-6.640000 |
hsa-let-7g-5p |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.330000 |
-6.340000 |
hsa-let-7i-5p |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.330000 |
-7.440000 |
hsa-miR-1294 |
aatacccctACCTCACtcc |
0 | UGUGAGGU | m7b | (m6b->m7b) | no TS | -0.212000 |
-0.100000 |
hsa-miR-1321 |
aataccCCTCCCTcactcc |
18 |
CAGGGAGG | m7b | Disrupted | -0.202000 | -0.022000 |
-0.400000 |
hsa-miR-149-3p |
aatacCCCTCCCTcactcc |
7 |
AGGGAGGG | m8a | Disrupted | -0.202000 | no TS |
-0.290000 |
hsa-miR-1914-3p |
aatACCCCTCCctcactcc |
7 |
GGAGGGGU | m8a | Disrupted | 0.000000 | no TS | No effect |
hsa-miR-202-3p |
aataccccTACCTCactcc |
0 | AGAGGUAU | m6b | Created | no TS | -0.116000 |
-0.290000 |
hsa-miR-4419a |
aatacccCTCCCTCActcc |
0 | UGAGGGAG | m8a | Disrupted | -0.307000 | no TS |
0.930000 |
hsa-miR-4458 |
aatacccCTACCTCactcc |
0 | AGAGGUAG | m7b | Created | no TS | -0.330000 |
-1.650000 |
hsa-miR-4500 |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.330000 |
-3.370000 |
hsa-miR-4510 |
aatacccCTCCCTCActcc |
0 | UGAGGGAG | m8a | Disrupted | -0.349000 | no TS |
-0.030000 |
hsa-miR-4728-5p |
aatacCCCTCCCtcactcc |
7 |
UGGGAGGG | m7b | Disrupted | -0.202000 | no TS |
-0.320000 |
hsa-miR-4739 |
aataccCCTCCCTcactcc |
18 |
AAGGGAGG | m7b | Disrupted | -0.206000 | -0.026000 |
0.030000 |
hsa-miR-4756-5p |
aataccCCTCCCTcactcc |
18 |
CAGGGAGG | m7b | Disrupted | -0.200000 | -0.029000 |
0.010000 |
hsa-miR-5194 |
aatACCCCTCcctcactcc |
7 |
UGAGGGGU | m7b | (m7b->m6c) | 0.000000 | no TS |
-0.010000 |
hsa-miR-98 |
aatacccCTACCTCActcc |
0 | UGAGGUAG | m8a | Created | no TS | -0.341000 |
-4.650000 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
60457239 | rs3198285 | A | A |
hsa-miR-4455 hsa-miR-4506 hsa-miR-609 hsa-miR-6772-5p |
17 19 17 17 |
tcatACACCCAtt tcatacACCCATT tcatACACCCAtt tcaTACACCCAtt |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.209 -0.239 -0.221 -0.497 |
C |
hsa-miR-6751-5p hsa-miR-6752-5p hsa-miR-6803-5p hsa-miR-6835-5p hsa-miR-6842-5p hsa-miR-7110-5p |
17 17 17 17 17 17 |
tcatACCCCCAtt tcatACCCCCAtt tcatACCCCCAtt tcaTACCCCCAtt tcatACCCCCAtt tcatACCCCCAtt |
Created Created Created Created Created Created |
N N N N N N |
-0.35 -0.255 -0.331 -0.553 -0.248 -0.248 |
|||
60457363 | rs112294072 | T | T |
hsa-miR-4799-5p hsa-miR-5692a |
3 0 |
tttATTTAGAtga tTTATTTAgatga |
Disrupted Disrupted |
N N |
-0.101 0.065 |
C |
hsa-miR-4427 hsa-miR-452-3p hsa-miR-4680-3p hsa-miR-5187-3p |
3 3 3 3 |
ttTATTCAGAtga tttattCAGATGA tttATTCAGAtga tttATTCAGAtga |
Created Created Created Created |
N N N N |
-0.281 -0.216 -0.084 -0.085 |
|||
60457372 | rs187957411 | T | |||||||
A |
hsa-miR-548c-3p |
12 |
ATTTTTAttttta |
Created |
N |
0.1 |
|||
60457378 | rs113962783 | A | A |
hsa-miR-548ac hsa-miR-548ae hsa-miR-548ah-3p hsa-miR-548aj-3p hsa-miR-548am-3p hsa-miR-548aq-3p hsa-miR-548d-3p hsa-miR-548h-3p hsa-miR-548j-3p hsa-miR-548x-3p hsa-miR-548z |
16 16 16 16 16 16 16 16 16 16 16 |
GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt GTTTTTAtttttt |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N N N N |
-0.016 -0.01 -0.01 -0.01 -0.01 -0.01 -0.009 -0.013 -0.006 -0.01 -0.013 |
60457952 | rs78623367 | G | G |
hsa-miR-130b-5p hsa-miR-4768-5p hsa-miR-6817-3p hsa-miR-6833-3p hsa-miR-6873-3p hsa-miR-7110-3p |
1 20 20 20 20 20 |
aaaAAAGAGAgaa aaaaaaGAGAGAA aaaaaAGAGAGAa aaaaaaGAGAGAA aaaaaAGAGAGAA aaaaaAGAGAGAa |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
0.017 -0.137 -0.076 -0.165 -0.257 -0.094 |
A |
hsa-miR-4753-3p hsa-miR-6809-3p |
20 20 |
aaaaaAAAGAGAA aaaaaaAAGAGAA |
Created Created |
N N |
-0.045 -0.094 |
|||
60457953 | rs76782440 | A | A |
hsa-miR-130b-5p hsa-miR-4753-3p hsa-miR-6817-3p hsa-miR-6873-3p hsa-miR-7110-3p |
1 1 20 20 20 |
aaaaAAAGAGAga aaaaAAAGAGAga aaaaaaAGAGAGA aaaaaaAGAGAGA aaaaaaAGAGAGA |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
-0.009 -0.085 -0.076 -0.166 -0.094 |
G |
hsa-miR-6845-3p |
1 |
aaaaaAGGAGAGA |
Created |
N |
-0.263 |
|||
60459950 | rs181979594 | A | A |
hsa-miR-4753-3p |
10 |
gagaaAAAGAGAg |
Disrupted |
N |
-0.045 |
G |
hsa-miR-130b-5p hsa-miR-6817-3p hsa-miR-6873-3p hsa-miR-7110-3p |
9 10 10 10 |
gaGAAAGAGAgag gagaaAGAGAGAg gagaaAGAGAGAg gagaaaGAGAGAG |
Created Created Created Created |
N N N N |
-0.129 -0.027 -0.138 -0.2 |
|||
60460362 | rs35310820 | - | C |
hsa-miR-6732-5p hsa-miR-6752-5p hsa-miR-6842-5p hsa-miR-7110-5p |
6 6 6 6 |
cACCCCCTttttc CACCCCCtttttc CACCCCCtttttc CACCCCCtttttc |
Unknown Unknown Unknown Unknown |
N N N N |
-0.275 -0.286 -0.286 -0.314 |
- |
hsa-miR-3936 hsa-miR-6782-5p |
6 6 |
cACCCCTTtttc CACCCCTttttc |
Unknown Unknown |
N N |
-0.193 -0.247 |