SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
RefSeq ID: | NM_001170714 |
---|---|
Gene Symbol: | BCAR1 |
Description: | Homo sapiens breast cancer anti-estrogen resistance 1 (BCAR1), transcript variant 1, mRNA. |
Gene Location: | chr16(-):75262927-75299905 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr16:g.75229267G>A | COSN14896946 | LP6005500-DNA_B03 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-490-3p |
cacgggcCCAGGTTGggtc |
0 | CAACCUGG | m8a | Created | no TS | -0.047000 |
-1.270000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr16:g.75229395G>T | COSN1190632 | HCC29T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-873-5p |
tctgcgtcGTTCCTGgtgc |
0 | GCAGGAAC | m7b | Created | no TS | -0.090000 |
-9.200000 |
hsa-miR-873-5p |
tctgcgtcGTTCCTGgtgc |
0 | GCAGGAAC | m7b | Created | no TS | -0.090000 |
-9.200000 |
hsa-miR-873-5p |
tctgcgtcGTTCCTGgtgc |
0 | GCAGGAAC | m7b | Created | no TS | -0.090000 |
-9.200000 |
hsa-miR-873-5p |
tctgcgtcGTTCCTGgtgc |
0 | GCAGGAAC | m7b | Created | no TS | -0.090000 |
-9.200000 |
hsa-miR-873-5p |
tctgcgtcGTTCCTGgtgc |
0 | GCAGGAAC | m7b | Created | no TS | -0.09 |
-9.2 |