SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_018842
Gene Symbol: BAIAP2L1
Description: Homo sapiens BAI1-associated protein 2-like 1 (BAIAP2L1), mRNA.
Gene Location: chr7(-):97920961-98030427
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.98291669T>G COSN9775244 C0096T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-126-5p cttTAATAATaaagcagaa
 0 CAUUAUUA m7b (m7b->m6c) -0.149000 no TS 1.250000
hsa-miR-3160-5p ctttaataAGAAAGCagaa
 0 GGCUUUCU m7b Created no TS -0.384000 -2.030000
hsa-miR-4795-3p ctttAATAATAaagcagaa
 0 AUAUUAUU m7b Disrupted -0.133000 no TS 2.600000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98291705T>A COSN2246274 RK165_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2278 cgaggtgcCTGCTCTgtaa
 0 GAGAGCAG m7b Disrupted -0.168000 no TS 0.010000
hsa-miR-4269 cgagGTGCCTGCtctgtaa
 1
 GCAGGCAC m8a Disrupted -0.250000 -0.056000 No effect
hsa-miR-4487 cgaggtgCCAGCTCTgtaa
 0 AGAGCUGG m8a Created -0.429000 -0.629000 -0.010000
hsa-miR-4690-5p cgaggtGCCTGCTCtgtaa
 0 GAGCAGGC m8a Disrupted -0.485000 -0.240000 No effect
hsa-miR-2278 cgaggtgcCTGCTCTgtaa
 0 GAGAGCAG m7b Disrupted -0.168000 no TS 0.010000
hsa-miR-4269 cgagGTGCCTGCtctgtaa
 1
 GCAGGCAC m8a Disrupted -0.250000 -0.056000 No effect
hsa-miR-4487 cgaggtgCCAGCTCTgtaa
 0 AGAGCUGG m8a Created -0.429000 -0.629000 -0.010000
hsa-miR-4690-5p cgaggtGCCTGCTCtgtaa
 0 GAGCAGGC m8a Disrupted -0.485000 -0.240000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98292125T>G COSN6900650 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-103a-3p gccgATGCTGCaggctcct
 1
 AGCAGCAU m7b Created -0.117000 -0.254000 -0.080000
hsa-miR-107 gccgATGCTGCaggctcct
 1
 AGCAGCAU m7b Created -0.117000 -0.254000 -0.260000
hsa-miR-1184 gccgatGCTGCAGGctcct
 1
 CCUGCAGC m8a Created -0.287000 -0.382000 -1.800000
hsa-miR-4293 gccgatgctTCAGGCTcct
 2
 CAGCCUGA m7b (m7b->m6b) -0.098000 no TS -0.450000
hsa-miR-4310 gccgATGCTGCaggctcct
 0 GCAGCAUU m7a Created NA NA -5.290000
hsa-miR-596 gccgatgctGCAGGCTcct
 0 AAGCCUGC m7b (m6b->m7b) no TS -0.146000 -0.100000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98292377A>C COSN2246276 RK189_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-33a-3p aaatacAAACATTagacag
 0 CAAUGUUU m7b Created no TS 0.089000 -7.460000
hsa-miR-409-3p aaatacaAACATTagacag
 0 GAAUGUUG m6b Created no TS 0.073000 -14.100000
hsa-miR-4307 aaatacAAACATTagacag
 0 AAUGUUUU m7a Created NA NA -1.040000
hsa-miR-4735-5p aaatacaaAAATTAGacag
 0 CCUAAUUU m7b Disrupted 0.059000 no TS 6.000000
hsa-miR-4775 aaatacaAAAATTAgacag
 2
 UUAAUUUU m7b Disrupted 0.116000 no TS 2.470000
hsa-miR-33a-3p aaatacAAACATTagacag
 0 CAAUGUUU m7b Created no TS 0.089000 -7.460000
hsa-miR-409-3p aaatacaAACATTagacag
 0 GAAUGUUG m6b Created no TS 0.073000 -14.100000
hsa-miR-4307 aaatacAAACATTagacag
 0 AAUGUUUU m7a Created NA NA -1.040000
hsa-miR-4735-5p aaatacaaAAATTAGacag
 0 CCUAAUUU m7b Disrupted 0.059000 no TS 6.000000
hsa-miR-4775 aaatacaAAAATTAgacag
 2
 UUAAUUUU m7b Disrupted 0.116000 no TS 2.470000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98292379A>T COSN2246278 RK189_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3149 aaaaATACAAAaattagac
 2
 UUUGUAUG m7a Disrupted 0.024000 no TS No effect
hsa-miR-32-3p aaaaatacaTAAATTagac
 15
 CAAUUUAG m6b Created 0.037000 0.174000 -0.880000
hsa-miR-3924 aaaaATACATAaattagac
 0 AUAUGUAU m7b Created no TS -0.070000 -6.080000
hsa-miR-4775 aaaaatacaAAAATTAgac
 2
 UUAAUUUU m7b (m7b->m6b) 0.116000 no TS 1.690000
hsa-miR-3149 aaaaATACAAAaattagac
 2
 UUUGUAUG m7a Disrupted 0.024000 no TS No effect
hsa-miR-32-3p aaaaatacaTAAATTagac
 15
 CAAUUUAG m6b Created 0.037000 0.174000 -0.880000
hsa-miR-3924 aaaaATACATAaattagac
 0 AUAUGUAU m7b Created no TS -0.070000 -6.080000
hsa-miR-4775 aaaaatacaAAAATTAgac
 2
 UUAAUUUU m7b (m7b->m6b) 0.116000 no TS 1.690000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98292837C>A COSN4894091 CME_0001_Pa_C [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1306-3p agtcGCCAACGgattcgct
 0 ACGUUGGC m7b Disrupted -0.167000 no TS 3.280000
hsa-miR-500a-5p agtcgccaAAGGATTcgct
 0 UAAUCCUU m7b Created no TS 0.043000 -0.020000
hsa-miR-501-5p agtcgccAAAGGATTcgct
 0 AAUCCUUU m8a Created -0.009000 0.060000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98292984C>T COSN1356077 HCC49T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1251 tagagcttCTAGAGatgga
 0 ACUCUAGC m6b Created no TS -0.064000 -4.250000
hsa-miR-1299 tagagcTTCCAGAgatgga
 0 UUCUGGAA m7b Disrupted -0.038000 no TS 4.600000
hsa-miR-3191-5p tagagcttCCAGAGAtgga
 0 CUCUCUGG m7b Disrupted -0.177000 no TS 0.340000
hsa-miR-326 tagagcttCCAGAGatgga
 0 CCUCUGGG m6b Disrupted -0.075000 no TS 0.090000
hsa-miR-3675-3p tagagcttcTAGAGATGga
 0 CAUCUCUA m8a (m7a->m8a) no TS -0.035000 2.570000
hsa-miR-517-5p tagagctTCTAGAGatgga
 0 CCUCUAGA m7b Created no TS -0.244000 -4.310000
hsa-miR-518c-5p tagagctTCCAGAGAtgga
 0 UCUCUGGA m8a Disrupted -0.276000 no TS 3.310000
hsa-miR-518d-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.920000
hsa-miR-518e-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-518f-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -2.020000
hsa-miR-519a-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-519b-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-519c-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-520c-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.920000
hsa-miR-522-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-523-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-526a tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.920000
hsa-miR-671-5p tagaGCTTCCagagatgga
 2
 AGGAAGCC m6b Disrupted -0.090000 no TS No effect
hsa-miR-875-3p tagagcTTCCAGagatgga
 0 CCUGGAAA m6b Disrupted -0.026000 no TS 0.020000
hsa-miR-1251 tagagcttCTAGAGatgga
 0 ACUCUAGC m6b Created no TS -0.064000 -4.250000
hsa-miR-1299 tagagcTTCCAGAgatgga
 0 UUCUGGAA m7b Disrupted -0.038000 no TS 4.600000
hsa-miR-3191-5p tagagcttCCAGAGAtgga
 0 CUCUCUGG m7b Disrupted -0.177000 no TS 0.340000
hsa-miR-326 tagagcttCCAGAGatgga
 0 CCUCUGGG m6b Disrupted -0.075000 no TS 0.090000
hsa-miR-3675-3p tagagcttcTAGAGATGga
 0 CAUCUCUA m8a (m7a->m8a) no TS -0.035000 2.570000
hsa-miR-517-5p tagagctTCTAGAGatgga
 0 CCUCUAGA m7b Created no TS -0.244000 -4.310000
hsa-miR-518c-5p tagagctTCCAGAGAtgga
 0 UCUCUGGA m8a Disrupted -0.276000 no TS 3.310000
hsa-miR-518d-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.920000
hsa-miR-518e-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-518f-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -2.020000
hsa-miR-519a-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-519b-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-519c-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-520c-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.920000
hsa-miR-522-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-523-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.710000
hsa-miR-526a tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.920000
hsa-miR-671-5p tagaGCTTCCagagatgga
 2
 AGGAAGCC m6b Disrupted -0.090000 no TS No effect
hsa-miR-875-3p tagagcTTCCAGagatgga
 0 CCUGGAAA m6b Disrupted -0.026000 no TS 0.020000
hsa-miR-1251 tagagcttCTAGAGatgga
 0 ACUCUAGC m6b Created no TS -0.064 -4.25
hsa-miR-1299 tagagcTTCCAGAgatgga
 0 UUCUGGAA m7b Disrupted -0.038 no TS 4.6
hsa-miR-3191-5p tagagcttCCAGAGAtgga
 0 CUCUCUGG m7b Disrupted -0.177 no TS 0.34
hsa-miR-326 tagagcttCCAGAGatgga
 0 CCUCUGGG m6b Disrupted -0.075 no TS 0.09
hsa-miR-3675-3p tagagcttcTAGAGATGga
 0 CAUCUCUA m8a (m7a->m8a) no TS -0.035 2.57
hsa-miR-517-5p tagagctTCTAGAGatgga
 0 CCUCUAGA m7b Created no TS -0.244 -4.31
hsa-miR-518c-5p tagagctTCCAGAGAtgga
 0 UCUCUGGA m8a Disrupted -0.276 no TS 3.31
hsa-miR-518d-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.92
hsa-miR-518e-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.71
hsa-miR-518f-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -2.02
hsa-miR-519a-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.71
hsa-miR-519b-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.71
hsa-miR-519c-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.71
hsa-miR-520c-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.92
hsa-miR-522-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.71
hsa-miR-523-5p tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.71
hsa-miR-526a tagagctTCTAGAGatgga
 0 CUCUAGAG m7a Created NA NA -1.92
hsa-miR-671-5p tagaGCTTCCagagatgga
 0 AGGAAGCC m6b Disrupted -0.09 no TS No effect
hsa-miR-875-3p tagagcTTCCAGagatgga
 0 CCUGGAAA m6b Disrupted -0.026 no TS 0.02

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98293069A>C COSN6900651 RK150_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3680-3p catcttagcATGCAAAtca
 11
 UUUUGCAU m7b (m7b->m6b) -0.069000 no TS 3.070000
hsa-miR-4639-5p catCTTAGCAtgcaaatca
 6
 UUGCUAAG m7b (m7b->m6c) -0.166000 no TS No effect
hsa-miR-4666b catcttagCATGCAAatca
 11
 UUGCAUGU m7a Disrupted -0.245000 -0.105000 4.160000
hsa-miR-5011-3p catcttagCATGCAaatca
 11
 GUGCAUGG m6b Disrupted -0.142000 no TS 4.608000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98293375C>G COSN15474853 AOCS-171-1-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3919 catgcTTCTCTGtttcacg
 1
 GCAGAGAA m7b Disrupted -0.112000 no TS 3.700000
hsa-miR-3919 catgcTTCTCTGtttcacg
 1
 GCAGAGAA m7b Disrupted -0.112000 no TS 3.700000

Mutation Mutation ID Sample Name Cancer Type
chr7:g.98293461A>G COSN15330587 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4700-3p gatgggcgcGTCCTGTctg
 0 CACAGGAC m7b (m6b->m7b) no TS -0.090000 -2.750000
hsa-miR-4787-3p gatgGGCGCATCctgtctg
 0 GAUGCGCC m8a Disrupted -0.258000 no TS 0.550000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Germline mutations in target sites of miRNAs in somatic mutation table
Location SNP ID Ancestral
Allele		 Allele miR ID Conservation miRSite FuncClass Validation context+
score change
98293461 rs12873 G A hsa-miR-4787-3p
0 gGGCGCATcctgt
 Created
N
 -0.258
G hsa-miR-1292-3p
hsa-miR-4700-3p
0 GGGCGCGtcctgt
gggcgcGTCCTGT
 Disrupted
Disrupted
N
N
 -0.391
-0.09

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