| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_153000 |
|---|---|
| Gene Symbol: | APCDD1 |
| Description: | Homo sapiens adenomatosis polyposis coli down-regulated 1 (APCDD1), mRNA. |
| Gene Location: | chr18(+):10454624-10488698 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr18:g.10488508G>T | COSN6114003 | RK121_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-186-3p |
agttggTTTGGGactgtga |
7 |
GCCCAAAG | m6b | Disrupted | -0.064000 | no TS |
0.480000 |
| hsa-miR-455-3p |
agttggtttTGGACTGtga |
0 | GCAGUCCA | m7b | (m6c->m7b) | no TS | -0.248000 |
-2.590000 |
| hsa-miR-548aa |
agtTGGTTTTggactgtga |
0 | AAAAACCA | m7b | (m6b->m7b) | no TS | -0.050000 |
-0.830000 |
| hsa-miR-548ap-3p |
agtTGGTTTTggactgtga |
0 | AAAAACCA | m7b | (m6b->m7b) | no TS | -0.050000 |
3.360000 |
| hsa-miR-548o-3p |
agttgGTTTTGGactgtga |
0 | CCAAAACU | m7a | Created | NA | NA | No effect |
| hsa-miR-548t-3p |
agtTGGTTTTggactgtga |
0 | AAAAACCA | m7b | (m6b->m7b) | no TS | -0.050000 |
-0.830000 |
| hsa-miR-5588-3p |
agttggttTGGGACTgtga |
8 |
AAGUCCCA | m7b | Disrupted | -0.233000 | no TS |
8.290000 |