SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001127493
Gene Symbol: ANK2
Description: Homo sapiens ankyrin 2, neuronal (ANK2), transcript variant 3, mRNA.
Gene Location: chr4(+):113739238-114304896
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.113381519G>A COSN2382532 TCGA-BG-A0LX-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.113381770G>A COSN6791457 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4718 caaataTACAGCattttgc
 0 AGCUGUAC m6b Created no TS -0.163000 -1.770000
hsa-miR-4999-5p caaatATACAGCAttttgc
 0 UGCUGUAU m8a Created no TS -0.370000 -0.010000


Mutation Mutation ID Sample Name Cancer Type
chr4:g.113382646C>G COSN9585324 AOCS-145-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.113383078A>C COSN5050917 HX35T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5003-3p ttaaaGAAAAGTAtattca
 13
 UACUUUUC m8a Disrupted -0.139000 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr4:g.113383702A>G COSN8370127 tumor_4177376 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3157-5p caaTGGCTGAtttaattaa
 20
 UUCAGCCA m7b (m7b->m6b) -0.348000 no TS 0.970000
hsa-miR-34a-3p caatgGCTGATTtaattaa
 18
 CAAUCAGC m7b Disrupted -0.262000 no TS 0.600000
hsa-miR-497-3p caatggcTGGTTTaattaa
 0 CAAACCAC m6b Created -0.058000 -0.158000 -3.380000
hsa-miR-551b-5p caatggcTGATTTaattaa
 18
 GAAAUCAA m6b Disrupted -0.269000 -0.233000 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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