| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_181847 |
|---|---|
| Gene Symbol: | AMIGO2 |
| Description: | Homo sapiens adhesion molecule with Ig-like domain 2 (AMIGO2), transcript variant 1, mRNA. |
| Gene Location: | chr12(-):47469489-47473734 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr12:g.47076212C>G | COSN15398973 | 0082_CRUK_PC_0082_T1_DNA | [prostate][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-2681-5p |
tctGTAAAACaaaggtttc |
0 | GUUUUACC | m7a | (m7a->m6b) | NA | NA |
0.130000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr12:g.47076529A>G | COSN7616246 | PCSI_0356_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4263 |
ggctatTTAGAAacataaa |
0 | AUUCUAAG | m6b | Created | no TS | 0.039000 |
-3.650000 |
| hsa-miR-4307 |
ggctatttaAAAACATaaa |
2 |
AAUGUUUU | m7b | (m7b->m6b) | -0.058000 | -0.010000 |
0.100000 |
| hsa-miR-4799-5p |
ggctATTTAGAaacataaa |
0 | AUCUAAAU | m7b | Created | no TS | -0.004000 |
0.540000 |
| hsa-miR-576-5p |
ggctatTTAGAAacataaa |
0 | AUUCUAAU | m6b | Created | no TS | 0.030000 |
-0.030000 |