SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_000035
Gene Symbol: ALDOB
Description: Homo sapiens aldolase B, fructose-bisphosphate (ALDOB), mRNA.
Gene Location: chr9(-):104182841-104198062
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr9:g.101420658A>G COSN14797838 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-138-2-3p gggttaaGAAATAGtgctt
1
GCUAUUUC m7b Disrupted -0.171000 no TS 0.120000
hsa-miR-3675-3p gggttaAGAGATagtgctt
0 CAUCUCUA m6b Created no TS -0.104000 -2.740000

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421026G>A COSN15409833 0064_CRUK_PC_0064_T1_DNA [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-382-3p atgtaGAATGATTttgagc
0 AAUCAUUC m8a Disrupted -0.175000 -0.033000 0.380000
hsa-miR-944 atgtagAATAATTTtgagc
0 AAAUUAUU m8a Created no TS 0.015000 -0.040000

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421264T>C COSN2302053 RK184_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-219-1-3p ctTCAACTCTtgctagtca
2
AGAGUUGA m8a (m8a->m7b) -0.143000 -0.116000 0.220000
hsa-miR-4433-3p cttcaACTCCTGctagtca
0 ACAGGAGU m7b Created no TS -0.122000 -1.350000
hsa-miR-451b cttcaacTCTTGCTAgtca
1
UAGCAAGA m8a Disrupted -0.234000 -0.061000 1.430000
hsa-miR-4690-5p cttcaactCCTGCTagtca
0 GAGCAGGC m6b Created no TS -0.110000 -2.280000
hsa-miR-4722-5p cttcaaCTCCTGCtagtca
0 GGCAGGAG m7b Created no TS -0.197000 -2.400000

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421373T>A COSN2302054 RK051_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-22-3p accttcaGCAGCTatcggg
0 AAGCUGCC m6b Created no TS -0.148000 -0.400000
hsa-miR-424-5p accttcaGCTGCTatcggg
2
CAGCAGCA m6b Disrupted -0.127000 no TS 1.584000
hsa-miR-4524a-5p accttcaGCTGCTATcggg
2
AUAGCAGC m8a Disrupted -0.205000 no TS 1.450000
hsa-miR-4524b-5p accttcaGCTGCTATcggg
2
AUAGCAGC m8a Disrupted -0.195000 no TS 0.500000
hsa-miR-497-5p accttcaGCTGCTatcggg
2
CAGCAGCA m6b Disrupted -0.127000 no TS 4.670000
hsa-miR-646 accttcAGCTGCTatcggg
2
AAGCAGCU m7b Disrupted -0.278000 no TS 1.510000
hsa-miR-93-3p acctTCAGCAGctatcggg
0 ACUGCUGA m7b Created no TS -0.158000 0.030000
hsa-miR-22-3p accttcaGCAGCTatcggg
0 AAGCUGCC m6b Created no TS -0.148 -0.4
hsa-miR-424-5p accttcaGCTGCTatcggg
0 CAGCAGCA m6b Disrupted -0.127 no TS 1.584
hsa-miR-4524a-5p accttcaGCTGCTATcggg
0 AUAGCAGC m8a Disrupted -0.205 no TS 1.45
hsa-miR-4524b-5p accttcaGCTGCTATcggg
0 AUAGCAGC m8a Disrupted -0.195 no TS 0.5
hsa-miR-497-5p accttcaGCTGCTatcggg
0 CAGCAGCA m6b Disrupted -0.127 no TS 4.67
hsa-miR-646 accttcAGCTGCTatcggg
0 AAGCAGCU m7b Disrupted -0.278 no TS 1.51
hsa-miR-93-3p acctTCAGCAGctatcggg
0 ACUGCUGA m7b Created no TS -0.158 0.03

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421388C>A COSN2302055 RK051_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-369-3p ataaaTATTATataaacct
1
AAUAAUAC m6b Created -0.014000 0.005000 -1.190000
hsa-miR-374a-5p ataaaTATTATAtaaacct
1
UUAUAAUA m7b Created -0.122000 -0.175000 -1.980000
hsa-miR-374b-5p ataaaTATTATATaaacct
1
AUAUAAUA m8a Created -0.122000 -0.175000 -2.250000
hsa-miR-410 ataaataTTATATaaacct
0 AAUAUAAC m6b Created no TS 0.031000 -2.560000
hsa-miR-5692b ataaATATTATataaacct
1
AAUAAUAU m7b Created -0.116000 -0.168000 -0.080000
hsa-miR-5692c ataaATATTATataaacct
1
AAUAAUAU m7b Created -0.116000 -0.168000 -0.060000
hsa-miR-369-3p ataaaTATTATataaacct
0 AAUAAUAC m6b Created -0.014 0.005 -1.19
hsa-miR-374a-5p ataaaTATTATAtaaacct
0 UUAUAAUA m7b Created -0.122 -0.175 -1.98
hsa-miR-374b-5p ataaaTATTATATaaacct
0 AUAUAAUA m8a Created -0.122 -0.175 -2.25
hsa-miR-410 ataaataTTATATaaacct
0 AAUAUAAC m6b Created no TS 0.031 -2.56
hsa-miR-5692b ataaATATTATataaacct
0 AAUAAUAU m7b Created -0.116 -0.168 -0.08
hsa-miR-5692c ataaATATTATataaacct
0 AAUAAUAU m7b Created -0.116 -0.168 -0.06

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421740C>T COSN14876520 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3125 cttTTCCTCTAatcctgga
5
UAGAGGAA m8a Created -0.060000 -0.396000 No effect
hsa-miR-3159 cttttcctcTAATCCTgga
0 UAGGAUUA m7b (m6b->m7b) no TS -0.096000 -0.050000
hsa-miR-3916 cttTTCCTCTaatcctgga
5
AAGAGGAA m7b (m6c->m7b) -0.060000 -0.407000 -2.350000
hsa-miR-3928 cttTTCCTCCaatcctgga
0 GGAGGAAC m7a (m7a->m6b) NA NA No effect
hsa-miR-765 ctttTCCTCCAatcctgga
2
UGGAGGAG m7a Disrupted -0.165000 no TS 0.020000
hsa-miR-766-5p cttTTCCTCCaatcctgga
2
AGGAGGAA m7b (m7b->m6c) -0.432000 no TS 2.030000
hsa-miR-877-5p ctttTCCTCTAatcctgga
1
GUAGAGGA m7b Created -0.255000 -0.662000 -0.460000

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421745T>C COSN1370905 HCC89T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3153 agcaaCTTTCCCtccaatc
0 GGGGAAAG m7b Created no TS -0.147000 -1.480000
hsa-miR-3928 agcaacttTTCCTCCaatc
0 GGAGGAAC m7a Disrupted NA NA No effect
hsa-miR-5584-5p agcaacTTTCCCTccaatc
0 CAGGGAAA m7b Created no TS -0.080000 -0.010000
hsa-miR-765 agcaactttTCCTCCAatc
2
UGGAGGAG m7a (m7a->m6a) -0.165000 no TS 0.020000
hsa-miR-766-5p agcaacttTTCCTCCaatc
2
AGGAGGAA m7b Disrupted -0.432000 no TS 8.620000
hsa-miR-3153 agcaaCTTTCCCtccaatc
0 GGGGAAAG m7b Created no TS -0.147000 -1.480000
hsa-miR-3928 agcaacttTTCCTCCaatc
0 GGAGGAAC m7a Disrupted NA NA No effect
hsa-miR-5584-5p agcaacTTTCCCTccaatc
0 CAGGGAAA m7b Created no TS -0.080000 -0.010000
hsa-miR-765 agcaactttTCCTCCAatc
2
UGGAGGAG m7a (m7a->m6a) -0.165000 no TS 0.020000
hsa-miR-766-5p agcaacttTTCCTCCaatc
2
AGGAGGAA m7b Disrupted -0.432000 no TS 8.620000
hsa-miR-3153 agcaaCTTTCCCtccaatc
0 GGGGAAAG m7b Created no TS -0.147 -1.48
hsa-miR-3928 agcaacttTTCCTCCaatc
0 GGAGGAAC m7a Disrupted NA NA No effect
hsa-miR-5584-5p agcaacTTTCCCTccaatc
0 CAGGGAAA m7b Created no TS -0.08 -0.01
hsa-miR-765 agcaactttTCCTCCAatc
0 UGGAGGAG m7a (m7a->m6a) -0.165 no TS 0.02
hsa-miR-766-5p agcaacttTTCCTCCaatc
0 AGGAGGAA m7b Disrupted -0.432 no TS 8.62

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421754A>G COSN1370906 HCC11T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-204-5p ctgAAAGGGAgcaactttt
1
UUCCCUUU m7b (m7b->m6c) -0.133000 no TS 0.400000
hsa-miR-211-5p ctgAAAGGGAgcaactttt
1
UUCCCUUU m7b (m7b->m6c) -0.124000 no TS No effect
hsa-miR-4287 ctgaAAGGGAGcaactttt
1
UCUCCCUU m7b Disrupted -0.185000 no TS -0.200000
hsa-miR-4313 ctgaaAGGGGGCaactttt
0 AGCCCCCU m7b Created no TS -0.584000 -9.010000
hsa-miR-4469 ctgaaAGGGAGCaactttt
0 GCUCCCUC m7a Disrupted NA NA No effect
hsa-miR-4685-3p ctgaAAGGGAGcaactttt
1
UCUCCCUU m7b Disrupted -0.232000 no TS No effect
hsa-miR-204-5p ctgAAAGGGAgcaactttt
1
UUCCCUUU m7b (m7b->m6c) -0.133000 no TS 0.400000
hsa-miR-211-5p ctgAAAGGGAgcaactttt
1
UUCCCUUU m7b (m7b->m6c) -0.124000 no TS No effect
hsa-miR-4287 ctgaAAGGGAGcaactttt
1
UCUCCCUU m7b Disrupted -0.185000 no TS -0.200000
hsa-miR-4313 ctgaaAGGGGGCaactttt
0 AGCCCCCU m7b Created no TS -0.584000 -9.010000
hsa-miR-4469 ctgaaAGGGAGCaactttt
0 GCUCCCUC m7a Disrupted NA NA No effect
hsa-miR-4685-3p ctgaAAGGGAGcaactttt
1
UCUCCCUU m7b Disrupted -0.232000 no TS No effect
hsa-miR-204-5p ctgAAAGGGAgcaactttt
0 UUCCCUUU m7b (m7b->m6c) -0.133 no TS 0.4
hsa-miR-211-5p ctgAAAGGGAgcaactttt
0 UUCCCUUU m7b (m7b->m6c) -0.124 no TS No effect
hsa-miR-4287 ctgaAAGGGAGcaactttt
0 UCUCCCUU m7b Disrupted -0.185 no TS -0.2
hsa-miR-4313 ctgaaAGGGGGCaactttt
0 AGCCCCCU m7b Created no TS -0.584 -9.01
hsa-miR-4469 ctgaaAGGGAGCaactttt
0 GCUCCCUC m7a Disrupted NA NA No effect
hsa-miR-4685-3p ctgaAAGGGAGcaactttt
0 UCUCCCUU m7b Disrupted -0.232 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr9:g.101421776T>C COSN9461343 8068595 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-28-3p tccagtgctTCTAGTagga
0 CACUAGAU m6b Disrupted -0.082000 no TS 0.680000
hsa-miR-28-5p tccagtGCTCCTagtagga
0 AAGGAGCU m6b Created no TS -0.156000 No effect
hsa-miR-708-5p tccagtGCTCCTagtagga
0 AAGGAGCU m6b Created no TS -0.160000 -0.140000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Germline mutations in target sites of miRNAs in somatic mutation table

Location SNP ID Ancestral
Allele
Allele miR ID Conservation miRSite FuncClass Validation context+
score change
101420960 rs181650438 T
C hsa-miR-451b
0 tTCTTGCTcaagt
Created
N
-0.132
101421740 rs4577 C C hsa-miR-4443
hsa-miR-6515-5p
hsa-miR-6894-5p
hsa-miR-7154-3p
hsa-miR-765
hsa-miR-766-5p
2
2
2
2
2
2
ttCCTCCAAtcct
ttCCTCCAAtcct
tTCCTCCAatcct
tTCCTCCAatcct
tTCCTCCAatcct
TTCCTCCAatcct
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
N
N
N
N
N
N
-0.18
-0.168
-0.188
-0.196
-0.165
-0.432
T hsa-miR-3125
hsa-miR-3159
hsa-miR-3916
hsa-miR-6859-5p
hsa-miR-6866-5p
hsa-miR-877-5p
2
2
2
2
2
2
TTCCTCTAatcct
ttcctcTAATCCT
TTCCTCTAatcct
TTCCTCTAatcct
ttCCTCTAAtcct
tTCCTCTAAtcct
Created
Created
Created
Created
Created
Created
N
N
N
N
N
N
-0.336
-0.096
-0.347
-0.368
-0.154
-0.407
101421755 rs28580764 G G hsa-miR-204-5p
hsa-miR-211-5p
hsa-miR-4287
hsa-miR-4685-3p
hsa-miR-6772-3p
hsa-miR-6832-3p
hsa-miR-7106-3p
1
1
1
1
2
1
1
gAAAGGGAgcaac
gAAAGGGAgcaac
gaAAGGGAGcaac
gaAAGGGAGcaac
gaaagGGAGCAAc
gAAAGGGAgcaac
gaaAGGGAGCAac
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
N
N
N
N
N
N
N
-0.133
-0.124
-0.185
-0.232
-0.179
-0.079
-0.533
A hsa-miR-2115-5p
hsa-miR-3977
hsa-miR-516a-3p
hsa-miR-516b-3p
hsa-miR-7162-5p
2
2
1
1
1
gaaaGGAAGCAac
gaaagGAAGCAAc
gaaAGGAAGCAac
gaaAGGAAGCAac
gaaAGGAAGCAac
Created
Created
Created
Created
Created
N
N
N
N
N
-0.169
-0.117
-0.418
-0.418
-0.45
101421756 rs183809646 G G hsa-miR-204-5p
hsa-miR-211-5p
hsa-miR-4287
hsa-miR-4685-3p
hsa-miR-6772-3p
hsa-miR-6832-3p
hsa-miR-7106-3p
1
1
1
1
2
1
1
tgAAAGGGAgcaa
tgAAAGGGAgcaa
tgaAAGGGAGcaa
tgaAAGGGAGcaa
tgaaagGGAGCAA
tgAAAGGGAgcaa
tgaaAGGGAGCAa
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
Disrupted
N
N
N
N
N
N
N
-0.133
-0.124
-0.185
-0.232
-0.179
-0.079
-0.533
A hsa-miR-130b-5p
hsa-miR-4753-3p
hsa-miR-5691
hsa-miR-6805-3p
1
1
2
2
tGAAAGAGAgcaa
tgAAAGAGAgcaa
tgaaagAGAGCAA
tgaaagAGAGCAA
Created
Created
Created
Created
N
N
N
N
-0.207
-0.055
-0.126
-0.133

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