SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_144497
Gene Symbol: AKAP12
Description: Homo sapiens A kinase (PRKA) anchor protein 12 (AKAP12), transcript variant 1, mRNA.
Gene Location: chr6(+):151646665-151679694
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.151357245A>G ICGC_A157035A-2A78-11E2-8335-12FD496BB9B8 CPCG_0102_Pr_P_P2 ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1227 tggagtgcaGTGGCACGat
 0 CGUGCCAC m8a (m7b->m8a) no TS -0.051 -1.881
hsa-miR-1273g-3p tggagtGCAGTGGcacgat
 0 ACCACUGC m7b Created -0.072 -0.177 -5.63
hsa-miR-25-3p tggaGTGCAATGgcacgat
 0 CAUUGCAC m8a Disrupted 0.089 no TS 0.01
hsa-miR-32-5p tggaGTGCAATggcacgat
 0 UAUUGCAC m7b Disrupted 0.089 no TS No effect
hsa-miR-363-3p tggaGTGCAATggcacgat
 0 AAUUGCAC m7b Disrupted 0.07 no TS 0.01
hsa-miR-367-3p tggaGTGCAATggcacgat
 0 AAUUGCAC m7b Disrupted 0.079 no TS 0.21
hsa-miR-4252 tggagtgCAGTGGCacgat
 0 GGCCACUG m7b Created no TS -0.047 -2.03
hsa-miR-4793-3p tggAGTGCAGtggcacgat
 0 UCUGCACU m7b (m6b->m7b) -0.119 -0.051 No effect
hsa-miR-92a-3p tggaGTGCAATggcacgat
 0 UAUUGCAC m7b Disrupted 0.089 no TS 0.04
hsa-miR-92b-3p tggaGTGCAATggcacgat
 0 UAUUGCAC m7b Disrupted 0.089 no TS 0.01

Mutation Mutation ID Sample Name Cancer Type
chr6:g.151357265C>T ICGC_A1570832-2A78-11E2-8335-12FD496BB9B8 CPCG_0102_Pr_P_P2 ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4746-3p tcagctCACCGCaacctcc
 0 AGCGGUGC m6b Disrupted -0.08 no TS 9.31
hsa-miR-4792 tcaGCTCACCGcaacctcc
 0 CGGUGAGC m8a Disrupted -0.175 -0.141 1.25

Mutation Mutation ID Sample Name Cancer Type
chr6:g.151357288C>A 10_5013 6408 Breast cancer
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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