SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001102470 |
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Gene Symbol: | ADH6 |
Description: | Homo sapiens alcohol dehydrogenase 6 (class V) (ADH6), transcript variant 2, mRNA. |
Gene Location: | chr4(-):100123794-100140403 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr4:g.99203179C>G | COSN8348342 | 0007_CRUK_PC_0007_T2_DNA | [prostate][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-198 |
cccctagcTCTGGACtccc |
1 |
GGUCCAGA | m7b | Disrupted | -0.298000 | -0.216000 |
0.750000 |
hsa-miR-520a-5p |
cccctagCTCTGGActccc |
3 |
CUCCAGAG | m7b | Disrupted | -0.211000 | -0.172000 | No effect |
hsa-miR-525-5p |
cccctagCTCTGGActccc |
3 |
CUCCAGAG | m7b | Disrupted | -0.202000 | -0.172000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.99204037C>G | COSN8489814 | J33_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-409-5p |
ttgttcttaGGTAACCcag |
0 | AGGUUACC | m7b | (m6b->m7b) | no TS | -0.275000 |
-0.680000 |