SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_000669
Gene Symbol: ADH1C
Description: Homo sapiens alcohol dehydrogenase 1C (class I), gamma polypeptide (ADH1C), mRNA.
Gene Location: chr4(-):100257648-100273917
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.99336734C>T COSN14654467 TCGA-EE-A3JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3910 agATGCCTTTccttgtagc
8
AAAGGCAU m8a (m7b->m8a) 0.000000 0.000000 No effect
hsa-miR-4747-5p agatgCCTTCCCTtgtagc
3
AGGGAAGG m8a Disrupted 0.000000 no TS No effect
hsa-miR-5196-5p agatgCCTTCCCTtgtagc
3
AGGGAAGG m8a Disrupted 0.000000 no TS 2.410000
hsa-miR-548an agaTGCCTTTccttgtagc
0 AAAAGGCA m7b (m6c->m7b) no TS 0.000000 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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