SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001017992
Gene Symbol: ACTBL2
Description: Homo sapiens actin, beta-like 2 (ACTBL2), mRNA.
Gene Location: chr5(-):56775842-56778636
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.57480081T>C COSN6922686 RK163_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1270 caaaattaATCTCCAaaaa
 7
 CUGGAGAU m7b Disrupted -0.447000 no TS No effect
hsa-miR-3676-5p caaaattaATCTCCaaaaa
 7
 AGGAGAUC m6b Disrupted -0.207000 no TS 1.530000
hsa-miR-3689d caaaattaACCTCCaaaaa
 0 GGGAGGUG m6b Created no TS -0.219000 -0.380000
hsa-miR-4443 caaaattaaCCTCCAAaaa
 0 UUGGAGGC m7a (m6a->m7a) no TS -0.234000 -10.980000
hsa-miR-4531 caaaattaaTCTCCAaaaa
 0 AUGGAGAA m6b Disrupted -0.281000 -0.095000 0.050000
hsa-miR-4683 caaaattaATCTCCAaaaa
 7
 UGGAGAUC m7a Disrupted -0.197000 no TS 0.320000
hsa-miR-620 caaaattaATCTCCAaaaa
 7
 AUGGAGAU m7b Disrupted -0.457000 no TS 1.150000

Mutation Mutation ID Sample Name Cancer Type
chr5:g.57480645G>T COSN6922687 RK183_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1915-5p ttgtGCAAGGatttcactg
 6
 ACCUUGCC m6b Disrupted -0.100000 no TS 2.970000
hsa-miR-362-5p ttgtgCAAGGATTtcactg
 7
 AAUCCUUG m8a Disrupted -0.086000 no TS 1.350000
hsa-miR-500a-5p ttgtgcAAGGATTtcactg
 6
 UAAUCCUU m7b Disrupted -0.027000 -0.031000 3.280000
hsa-miR-500b ttgtgCAAGGATTtcactg
 7
 AAUCCUUG m8a Disrupted -0.068000 no TS 6.430000
hsa-miR-502-5p ttgtGCAAGGATttcactg
 6
 AUCCUUGC m8a Disrupted -0.164000 no TS 1.200000

Mutation Mutation ID Sample Name Cancer Type
chr5:g.57480808T>A COSN15409541 0064_CRUK_PC_0064_T1_DNA [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1267 taccaaaaCAACAGacaat
 0 CCUGUUGA m6b Created no TS -0.057000 -1.430000
hsa-miR-19a-5p tacCAAAACTacagacaat
 0 AGUUUUGC m7a (m7a->m6b) no TS 0.015000 -0.270000
hsa-miR-19b-1-5p tacCAAAACTacagacaat
 0 AGUUUUGC m7a (m7a->m6b) no TS 0.015000 -0.320000
hsa-miR-19b-2-5p tacCAAAACTacagacaat
 0 AGUUUUGC m7a (m7a->m6b) no TS 0.012000 -0.310000
hsa-miR-2052 tacCAAAACAacagacaat
 0 UGUUUUGA m7a (m6b->m7a) no TS 0.013000 -0.230000
hsa-miR-20b-3p taccaaaACTACAGacaat
 0 ACUGUAGU m7b Disrupted -0.193000 no TS 2.270000
hsa-miR-367-5p taccaaaaCAACAGacaat
 0 ACUGUUGC m6b Created no TS -0.064000 -0.040000

Mutation Mutation ID Sample Name Cancer Type
chr5:g.57481481C>T COSN7947871 8050103 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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