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Somatic mutations altering microRNA-ceRNA interactions
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Browse somatic mutations in experimentally identified miRNA target sites: PAR-CLIP, HITS-CLIP


Total 34 records

[download data table]
Experiment Type RBP Cell Treatment PubMed ID Dataset Browse Table by
Cluster Tag
PAR-CLIP AGO1 HEK293 4-thiouridine, RNase T1 20371350 GSE21918 HPTA1
PAR-CLIP AGO2 HEK293 4-thiouridine, RNase T1 20371350 GSE21918 HPTA2
PAR-CLIP AGO2 HEK293 miR-124 transfected, 4-thiouridine, RNase T1 20371350 GSE21918 HPTK1
PAR-CLIP AGO2 HEK293 miR-7 transfected, 4-thiouridine, RNase T1 20371350 GSE21918 HPTK7
PAR-CLIP AGO3 HEK293 4-thiouridine, RNase T1 20371350 GSE21918 HPTA3
PAR-CLIP AGO4 HEK293 4-thiouridine, RNase T1 20371350 GSE21918 HPTA4
HITS-CLIP AGO2 Hela PTB specific shRNA 21258322 GSE42701 HHFKP
HITS-CLIP AGO2 HEK293 completeT1, repA 21572407 GSE28865 HHKTA
HITS-CLIP AGO2 HEK293 completeT1, repB 21572407 GSE28865 HHKTB
PAR-CLIP AGO2 HEK293 completeT1, repA 21572407 GSE28865 HPKTA
PAR-CLIP AGO2 HEK293 completeT1, repB 21572407 GSE28865 HPKTB
PAR-CLIP AGO2 HEK293 mildMNase, repA 21572407 GSE28865 HPKMA
PAR-CLIP AGO2 HEK293 mildMNase, repB 21572407 GSE28865 HPKMB
PAR-CLIP AGO2 hESCs (WA-09) 4-thiouridine, RNase T1 22012620 SupplementaryData HPHES
PAR-CLIP AGO2 BC-1 KSHV-infected, 4-thiouridine 22100165 GSE32109 HPCB1
PAR-CLIP AGO2 BC-3 KSHV-infected, 4-thiouridine 22100165 GSE32109 HPCB3
PAR-CLIP AGO2 EF3D-AGO2 EBV B95-8-infected, 4-thiouridine, RNase T1 22291592 GSE41437 HPSEF
PAR-CLIP AGO2 LCL35 EBV B95-8-infected, 4-thiouridine, RNase T1 22291592 GSE41437 HPSLC
PAR-CLIP AGO2 LCL-BAC EBV B95-8-infected, 4-thiouridine, RNase T1 22291592 GSE41437 HPSLB
PAR-CLIP AGO2 LCL-BACD3 EBV B95-8-infected, 4-thiouridine, RNase T1 22291592 GSE41437 HPSD3
HITS-CLIP AGO2 Jijoye EBV-infected 22473208 SupplementalTable8 HHSJI
HITS-CLIP AGO2 BCBL-1 KSHV-infected, clusters in 2 of 3 replicates 22927820 GSE41357 HHRBL
HITS-CLIP AGO2 BC-3 KSHV-infected, clusters in 2 of 3 replicates 22927820 GSE41357 HHRBC
HITS-CLIP AGO2 Hela control shRNA 23313552 GSE42701 HHFCT
PAR-CLIP AGO1 HEK293 4-thiouridine, ML_MM_6 23446348 GSE43573 HPRO6
PAR-CLIP AGO1 HEK293 4-thiouridine, ML_MM_7 23446348 GSE43573 HPRO7
PAR-CLIP AGO1 HEK293 4-thiouridine, ML_MM_8 23446348 GSE43573 HPRO8
PAR-CLIP AGO2 HEK293 4-thiouridine, 3_ML_LG 23446348 GSE43573 HPRT3
HITS-CLIP AGO2 293S arsenite 23824327 GSE44404 HHHSA
HITS-CLIP AGO2 293S hippuristanol 23824327 GSE44404 HHHSH
HITS-CLIP AGO2 293S emetine 23824327 GSE44404 HHHSE
HITS-CLIP AGO2 293S no arsenite 23824327 GSE44404 HHHNA
HITS-CLIP AGO2 293S no hippuristanol 23824327 GSE44404 HHHNH
HITS-CLIP AGO2 293S no emetine 23824327 GSE44404 HHHNE