SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Browse genes associated with cancer risk that contain miRNA related somatic mutations

Somatic mutations that alter miRNA target sites: CLASH [4 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_003286	TOP1	chr20:g.41097323C>A
NM_003286	TOP1	chr20:g.41097330G>A
NM_003286	TOP1	chr20:g.41097331A>G
NM_003286	TOP1	chr20:g.41098217A>C

Somatic mutations that alter miRNA target sites: PAR-CLIP and HITS-CLIP [16 records found]

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Transcript ID	Gene Symbol	Mutation ID
NM_003286	TOP1	chr20:g.41061410A>G
NM_003286	TOP1	chr20:g.41061411G>T
NM_003286	TOP1	chr20:g.41061426C>A
NM_003286	TOP1	chr20:g.41061435C>T
NM_003286	TOP1	chr20:g.41076173A>G
NM_003286	TOP1	chr20:g.41076198C>G
NM_003286	TOP1	chr20:g.41081197A>C
NM_003286	TOP1	chr20:g.41081216G>A
NM_003286	TOP1	chr20:g.41081216G>T
NM_003286	TOP1	chr20:g.41081221G>T
hsa_circ_0060377	TOP1	chr20:g.41084499A>C
hsa_circ_0060377	TOP1	chr20:g.41084502A>C
hsa_circ_0060377	TOP1	chr20:g.41092514C>T
hsa_circ_0060377	TOP1	chr20:g.41092518G>C
hsa_circ_0060377	TOP1	chr20:g.41092541C>A
hsa_circ_0060377	TOP1	chr20:g.41092565G>T

Somatic mutations that alter predicted mRNA-miRNA target sites [2 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_003286	TOP1	chr20:g.41123688A>C
NM_003286	TOP1	chr20:g.41123690T>C