SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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Browse genes associated with cancer risk that contain miRNA related somatic mutations


Somatic mutations that alter miRNA target sites: CLASH [5 records found]

[download data table]
Transcript ID Gene Symbol Mutation ID
NM_002957 RXRA chr9:g.134417291C>A
NM_002957 RXRA chr9:g.134417293A>T
NM_002957 RXRA chr9:g.134417294C>T
NM_002957 RXRA chr9:g.134417295G>T
NM_002957 RXRA chr9:g.134417309G>A



Somatic mutations that alter miRNA target sites: PAR-CLIP and HITS-CLIP [21 records found]

[download data table]
Transcript ID Gene Symbol Mutation ID
hsa_circ_0089414 RXRA chr9:g.134338985C>T
hsa_circ_0089414 RXRA chr9:g.134343072C>A
hsa_circ_0089414 RXRA chr9:g.134343835C>T
hsa_circ_0089414 RXRA chr9:g.134380994A>T
hsa_circ_0089415 RXRA chr9:g.134410399C>T
hsa_circ_0089415 RXRA chr9:g.134417216C>T
hsa_circ_0089415 RXRA chr9:g.134417239C>T
hsa_circ_0089415 RXRA chr9:g.134417291C>A
hsa_circ_0089415 RXRA chr9:g.134417293A>T
hsa_circ_0089415 RXRA chr9:g.134417294C>T
hsa_circ_0089415 RXRA chr9:g.134417295G>T
hsa_circ_0089415 RXRA chr9:g.134421728C>T
NM_002957 RXRA chr9:g.134426275A>G
NM_002957 RXRA chr9:g.134431959G>A
NM_002957 RXRA chr9:g.134431973G>A
NM_002957 RXRA chr9:g.134431986C>T
NM_002957 RXRA chr9:g.134434201C>A
NM_002957 RXRA chr9:g.134436531CTCT>C
NM_002957 RXRA chr9:g.134436553G>A
NM_002957 RXRA chr9:g.134436561C>T
NM_002957 RXRA chr9:g.134436568A>G



Somatic mutations that alter predicted mRNA-miRNA target sites [13 records found]

[download data table]
Transcript ID Gene Symbol Mutation ID
NM_002957 RXRA chr9:g.134436653A>C
NM_002957 RXRA chr9:g.134437370G>C
NM_002957 RXRA chr9:g.134437460G>A
NM_002957 RXRA chr9:g.134437790G>A
NM_002957 RXRA chr9:g.134437854G>T
NM_002957 RXRA chr9:g.134437879G>C
NM_002957 RXRA chr9:g.134438527C>G
NM_002957 RXRA chr9:g.134438710C>T
NM_002957 RXRA chr9:g.134438737G>A
NM_002957 RXRA chr9:g.134438747C>T
NM_002957 RXRA chr9:g.134439239G>T
NM_002957 RXRA chr9:g.134439284T>A
NM_002957 RXRA chr9:g.134440465T>G