SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Browse genes associated with cancer risk that contain miRNA related somatic mutations

Somatic mutations that alter miRNA target sites: CLASH [7 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_001983	ERCC1	chr19:g.45419155G>A
NM_001983	ERCC1	chr19:g.45419158G>A
NM_001983	ERCC1	chr19:g.45421212C>A
NM_001983	ERCC1	chr19:g.45421212C>T
NM_001983	ERCC1	chr19:g.45421216G>A
NM_001983	ERCC1	chr19:g.45421217C>T
NM_001983	ERCC1	chr19:g.45421260C>G

Somatic mutations that alter miRNA target sites: PAR-CLIP and HITS-CLIP [12 records found]

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Transcript ID	Gene Symbol	Mutation ID
hsa_circ_0051487	ERCC1	chr19:g.45408600GGAA>G
hsa_circ_0051487	ERCC1	chr19:g.45408613GA>G
hsa_circ_0051487	ERCC1	chr19:g.45408621A>AA
hsa_circ_0051487	ERCC1	chr19:g.45408709C>T
hsa_circ_0051487	ERCC1	chr19:g.45409128C>T
hsa_circ_0051487	ERCC1	chr19:g.45409136G>C
hsa_circ_0051487	ERCC1	chr19:g.45409145C>T
hsa_circ_0051487	ERCC1	chr19:g.45409148G>A
hsa_circ_0051487	ERCC1	chr19:g.45409290T>C
hsa_circ_0051487	ERCC1	chr19:g.45409329G>T
hsa_circ_0051487	ERCC1	chr19:g.45409478G>T
hsa_circ_0051487	ERCC1	chr19:g.45409496C>T

Somatic mutations that alter predicted mRNA-miRNA target sites [12 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_001166049	ERCC1	chr19:g.45409063C>T
NM_001983	ERCC1	chr19:g.45409063C>T
NM_001166049	ERCC1	chr19:g.45409460G>A
NM_001983	ERCC1	chr19:g.45409460G>A
NM_001166049	ERCC1	chr19:g.45409420C>T
NM_001983	ERCC1	chr19:g.45409420C>T
NM_001166049	ERCC1	chr19:g.45409255G>G
NM_001983	ERCC1	chr19:g.45409255G>G
NM_001166049	ERCC1	chr19:g.45408924T>C
NM_001983	ERCC1	chr19:g.45408924T>C
NM_001166049	ERCC1	chr19:g.45409554G>C
NM_001983	ERCC1	chr19:g.45409554G>C